Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0001_B20
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_59651| Best HMM Match : UPF0089 (HMM E-Value=5.8e-06) 30 1.2
SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23) 29 2.1
SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11) 29 3.6
SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_34933| Best HMM Match : RVT_1 (HMM E-Value=3.5e-08) 28 4.8
SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0) 28 4.8
SB_55944| Best HMM Match : RVT_1 (HMM E-Value=1.6e-11) 28 4.8
SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_23661| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08) 28 6.3
SB_40048| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08) 28 6.3
SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_46333| Best HMM Match : EGF (HMM E-Value=1.10001e-40) 27 8.4
SB_25868| Best HMM Match : zf-GRF (HMM E-Value=5.1e-21) 27 8.4
>SB_41658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 448
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 355 GRYGLSISTCRWNTSANRFCSGASVQSTESAGRGVGCSSQMWGSNQSTSISPCQTIAEPP 534
G L+I + N +N G++ Q+ S + +G ++Q GSN TS++ T A PP
Sbjct: 204 GSNTLNIGSNTQNIESNTQNFGSNTQNIGSNTQNIGSNTQNIGSNTQTSVATLHTSARPP 263
Query: 535 ITSLRRI 555
T L ++
Sbjct: 264 QTLLPQV 270
>SB_59651| Best HMM Match : UPF0089 (HMM E-Value=5.8e-06)
Length = 425
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/62 (20%), Positives = 31/62 (50%)
Frame = +2
Query: 80 RHLLQTVSLCGRKVVSWSKPVSRAGMERVARALGVSCTDIALFAATDALRYFYEHSHVSP 259
R ++ L G+K WS+P ++++ G + D+ + + A+R +++ ++
Sbjct: 245 RSIVHGKDLKGKKKCVWSEPFDLNIVKQIKSKTGTTVNDVLMACLSLAIRRYFQKRGINN 304
Query: 260 PE 265
PE
Sbjct: 305 PE 306
>SB_12628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1163
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = +1
Query: 358 RYGLSISTCRWNTSANRFCSGASVQSTESAGRGVGCSSQMWGSNQSTSISP 510
RYGL S RW + F G S QS + A C S G Q T +SP
Sbjct: 852 RYGLHPSLVRWVAA---FLQGRS-QSVQIANSSSACKSPNGGIPQGTKLSP 898
>SB_26728| Best HMM Match : Disintegrin (HMM E-Value=1.9e-23)
Length = 1531
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 412 CSGASVQSTESAGRGVGCSSQMWGSNQSTSISPCQTIAEPPITS 543
CS A ++ST++ G+G+ S G + CQT+A I+S
Sbjct: 617 CSAAVLKSTDTLGQGMVASGTKCGDGKMCFNYQCQTLAGLGISS 660
>SB_48736| Best HMM Match : RVT_1 (HMM E-Value=1.4e-11)
Length = 1175
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 23 IYKAPSKLWTDTIRADDGKRHLLQTVSLCGRKVVSWSKPVSRAGMERVARALGVSCTD-I 199
+Y ++L+ ++D + +L + +C + ++ W P A +G+SCT+ I
Sbjct: 641 MYADDTQLYVSICPSED-RSSVLSRLEVCVKDILIWCIPSMEAIDINSPALIGISCTESI 699
Query: 200 ALFAATDALRYFYEHSHVSPPETI 271
+ F E H++ PE I
Sbjct: 700 HINTPAQIGIPFTETIHINSPELI 723
>SB_53724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1005
Score = 28.7 bits (61), Expect = 3.6
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -2
Query: 548 RNDVIGGSAIVWQGEMEVLWLEPHIWLEQPTP--RPALSVDCTLAPLQKRFAE 396
++DVI GS +V GEM +W P I + P P A+ P QK +E
Sbjct: 342 KDDVIRGSIVVKDGEM--MWPPPPIAMPPPAPPKGKAMVKPPEQTPFQKAMSE 392
>SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 750
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +1
Query: 361 YGLSISTCRWNTSANRFCSGASVQSTESAGRGVGCSSQMWGSNQSTSISP 510
YGL S RW + F G S QS + A C S G Q T +SP
Sbjct: 461 YGLHPSLVRWVAA---FLQGRS-QSVQIANSSSACKSPNGGIPQGTKLSP 506
>SB_34933| Best HMM Match : RVT_1 (HMM E-Value=3.5e-08)
Length = 390
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +1
Query: 361 YGLSISTCRWNTSANRFCSGASVQSTESAGRGVGCSSQMWGSNQSTSISP 510
YGL S RW + F G S QS + A C S G Q T +SP
Sbjct: 80 YGLHPSLVRWVAA---FLQGRS-QSVQIANSSSACKSPNGGIPQGTKLSP 125
>SB_4930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 1127
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +1
Query: 367 LSISTCRWNTSANRFCSGASVQSTESAGRGVGCSSQMWGSNQSTSISPCQ----TIAEPP 534
L+ TC W S C G S+ ++ G C S+ W + T P T +PP
Sbjct: 603 LNKKTCCWQCSR---CHGNSISNSPPNGSCQACPSRYWADDNHTLCHPITPTSVTFRDPP 659
>SB_55944| Best HMM Match : RVT_1 (HMM E-Value=1.6e-11)
Length = 387
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +1
Query: 361 YGLSISTCRWNTSANRFCSGASVQSTESAGRGVGCSSQMWGSNQSTSISP 510
YGL S RW + F G S QS + A C S G Q T +SP
Sbjct: 77 YGLHPSLVRWVAA---FLQGRS-QSVQIANSSSACKSPNGGIPQGTKLSP 122
>SB_2811| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/50 (38%), Positives = 22/50 (44%)
Frame = +1
Query: 361 YGLSISTCRWNTSANRFCSGASVQSTESAGRGVGCSSQMWGSNQSTSISP 510
YGL S RW + F G S QS + A C S G Q T +SP
Sbjct: 434 YGLHPSLVRWVAA---FLQGRS-QSVQIANSSSACKSPNGGIPQGTKLSP 479
>SB_23661| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)
Length = 490
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +2
Query: 104 LCGRKVVSWSKPVSRAGMERVARALGVSCTDIALFAATDALRYFYEHSHVSPP 262
+ G K +W+KP+ A ++ + G + D+ ALR + + + P
Sbjct: 261 MSGEKCFAWTKPLDLALVKAIKLRTGTTVNDVLSACLAGALRRYLKSEGLDEP 313
>SB_40048| Best HMM Match : UPF0089 (HMM E-Value=9.3e-08)
Length = 535
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/53 (22%), Positives = 24/53 (45%)
Frame = +2
Query: 104 LCGRKVVSWSKPVSRAGMERVARALGVSCTDIALFAATDALRYFYEHSHVSPP 262
+ G K +W+KP+ A ++ + G + D+ ALR + + + P
Sbjct: 261 MSGEKCFAWTKPLDLALVKAIKLRTGTTVNDVLSACLAGALRRYLKSEGLDEP 313
>SB_26778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1050
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 361 YGLSIST-CRWNTSANRFCSGASVQSTESAG-RGVGCSSQMWGSNQSTSISPCQTIA 525
YG++ + C+ + + FC ++ +AG G+ C++Q G N S CQ I+
Sbjct: 603 YGVNCTRFCKPDNESTFFCDKSTGTRVCNAGWYGINCTTQCVGRNDSFGHYTCQKIS 659
>SB_46333| Best HMM Match : EGF (HMM E-Value=1.10001e-40)
Length = 580
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 427 VQSTESAGRGVGCSSQMWGSNQSTSISPCQTI 522
+ +++G CS+ GS+ T + PC TI
Sbjct: 54 INKEDNSGYNCTCSAGFTGSDCETQVKPCDTI 85
>SB_25868| Best HMM Match : zf-GRF (HMM E-Value=5.1e-21)
Length = 614
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 418 GASVQSTESAGRGVGCSSQMWGSNQSTSISPCQT 519
GAS T ++GRG G ++ GSNQS+ + QT
Sbjct: 354 GAS--QTSASGRGRGRGTRTTGSNQSSRFNASQT 385
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,017,643
Number of Sequences: 59808
Number of extensions: 381982
Number of successful extensions: 1377
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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