Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_D15
(591 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12284| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 278 2e-75
SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0) 148 4e-36
SB_20291| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 71 5e-13
SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0) 44 1e-04
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.100
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 30 1.6
SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074) 29 2.8
SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37) 29 3.8
SB_17695| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_48373| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_53339| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_22113| Best HMM Match : WD40 (HMM E-Value=1.4) 28 5.0
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.0
SB_59275| Best HMM Match : CopB (HMM E-Value=7.9) 28 6.6
SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047) 28 6.6
SB_33610| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027) 28 6.6
SB_7135| Best HMM Match : MBOAT (HMM E-Value=0.0021) 28 6.6
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 27 8.7
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 27 8.7
>SB_12284| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 238
Score = 278 bits (682), Expect = 2e-75
Identities = 148/204 (72%), Positives = 162/204 (79%), Gaps = 25/204 (12%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDLYHEMKVGGVIT--DDY----------- 143
VLI ELINN+AK HGG SVFAGVGERTREGNDL EM G+I DD+
Sbjct: 34 VLIQELINNIAKGHGGLSVFAGVGERTREGNDLLREMLESGIIKYGDDFMHSMEEGGWDL 93
Query: 144 --------KTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRD----KEGQDVLLFIDNI 287
K SK + V+GQMNEPPGARARVAL+GLT+AE+FRD +G+DVL F+DNI
Sbjct: 94 SKVDKAGMKESKATFVFGQMNEPPGARARVALSGLTIAEYFRDGAGEAQGKDVLFFVDNI 153
Query: 288 FRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLT 467
FRFTQAGSEVSALLGR+PSAVGYQPTLAT+MG MQERIT+TK GSITSVQAVYVPADDLT
Sbjct: 154 FRFTQAGSEVSALLGRMPSAVGYQPTLATEMGAMQERITSTKKGSITSVQAVYVPADDLT 213
Query: 468 DPAPATTFAHLDATTVLSRAIAEL 539
DPAPATTFAHLDATTVLSR IAEL
Sbjct: 214 DPAPATTFAHLDATTVLSRKIAEL 237
>SB_7724| Best HMM Match : ATP-synt_ab_C (HMM E-Value=0)
Length = 448
Score = 148 bits (358), Expect = 4e-36
Identities = 69/76 (90%), Positives = 72/76 (94%)
Frame = +3
Query: 342 SAVGYQPTLATDMGNMQERITTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLS 521
+ VGYQPTLATDMG MQERITTTK GSITSVQA+YVPADDLTDPAPATTFAHLDATTVLS
Sbjct: 247 AGVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLS 306
Query: 522 RAIAELGVYPAVDPLD 569
R IAELG+YPAVDPLD
Sbjct: 307 RGIAELGIYPAVDPLD 322
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +3
Query: 3 VLIMELINNVAKAHGGFSVFAGVGERTREGNDL 101
VLIMELINNVAKAHGG+SVFAGVG + D+
Sbjct: 227 VLIMELINNVAKAHGGYSVFAGVGYQPTLATDM 259
>SB_20291| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 475
Score = 71.3 bits (167), Expect = 5e-13
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Frame = +3
Query: 57 VFAGVGERTREGNDLYHE-----MKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTG 221
++ G GER E +++ + +++ G + K + +LV N P AR TG
Sbjct: 131 IYVGCGERGNEMSEVLRDFPELTVEINGQVESIMK--RTALVANTSNMPVAAREASIYTG 188
Query: 222 LTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQERI 401
+TL+E+FRD G V + D+ R+ +A E+S L +P+ GY L + + ER
Sbjct: 189 ITLSEYFRDM-GHHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERA 247
Query: 402 -------TTTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGVYPAVD 560
+ GS+T V AV P D +DP + T + L + +A+ +P+++
Sbjct: 248 GRVSCLGNPQREGSVTIVGAVSPPGGDFSDPVTSATLNIVQVFWGLDKKLAQRKHFPSIN 307
Query: 561 PLDFY 575
L Y
Sbjct: 308 WLISY 312
>SB_21210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 55.6 bits (128), Expect = 3e-08
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 2/139 (1%)
Frame = +3
Query: 156 VSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGR 335
V L N+P R LT AE + + VL+ + ++ + +A EVSA
Sbjct: 175 VCLFLNLANDPTIERIITPRLALTTAEFLAYQCEKHVLVILTDMSSYAEALREVSAAREE 234
Query: 336 IPSAVGYQPTLATDMGNMQERITTTKA--GSITSVQAVYVPADDLTDPAPATTFAHLDAT 509
+P G+ + TD+ + ER + GSIT + + +P DD+T P P T +
Sbjct: 235 VPGRRGFPGYMYTDLATVYERAGRVEGRNGSITQIPILTMPNDDITHPIPDLTGYITEGQ 294
Query: 510 TVLSRAIAELGVYPAVDPL 566
+ R + +YP ++ L
Sbjct: 295 IYVDRQLHNRQIYPPINVL 313
>SB_49893| Best HMM Match : ATP-synt_ab (HMM E-Value=0)
Length = 313
Score = 43.6 bits (98), Expect = 1e-04
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Frame = +3
Query: 219 GLTLAEHFRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGNMQER 398
G T+ E+FRD+ G+D L+ D++ + A ++S LL R P Y + + ER
Sbjct: 42 GCTMGEYFRDR-GEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLER 100
Query: 399 IT---------------TTKAGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIA 533
+ T K GS+T++ + A D++ P + D L A+
Sbjct: 101 ASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMF 160
Query: 534 ELGVYPAVD 560
G+ PAV+
Sbjct: 161 NSGIRPAVN 169
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 33.9 bits (74), Expect = 0.100
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = -3
Query: 478 GAGSVRSSAGTYTACTLVMEPALVVVIRSCILPMSVASVGWYPTADGILPSKADTSDPAC 299
G+GS + T + + + +R + V+++G YP + PSK + S C
Sbjct: 1073 GSGSSPTRDTTLIVTYFTILKRVKISVRQVSVAQLVSALGCYPRETRLRPSKCEGSSSLC 1132
Query: 298 VNL---KILSINNSTSCPSLSLKCSASVNPVRAT 206
+++ + SI+++T+ P K S + R T
Sbjct: 1133 LSMRDTRNTSIDDATAFPQRDRKTSRKIQMHRIT 1166
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1
Query: 111 FHGRDRSPRASSPLRRQKQRIHRELSP 31
FHG +RSPR+ + R+++R E+SP
Sbjct: 983 FHGENRSPRSLASSPRRERRCSSEVSP 1009
>SB_35375| Best HMM Match : RVT_1 (HMM E-Value=0.00074)
Length = 996
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 81 TREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKEGQ 260
T EGN Y + GGV + + ++++ + + R + + GL +H ++ EGQ
Sbjct: 411 TPEGNYRYRRLAFGGVNSQELFDAEMNRILSGLQRVLNNRDDILIGGLNKDDHNKNFEGQ 470
>SB_34890| Best HMM Match : DnaJ (HMM E-Value=2.7e-37)
Length = 386
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 45 GGFSVFAGVGERTRE--GNDLYHEMKVGG 125
GG G+G R+R G DL+H +K GG
Sbjct: 102 GGMPFGGGMGGRSRRRRGEDLFHPLKAGG 130
>SB_17695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 194 TWRFVHLPVNQGDLGSFIVVCNNASDFHFMVEIVPLARPLPYAG 63
TWR + + + +L V N DFHF+V + L RP+ + G
Sbjct: 93 TWR-LDVAEDLNNLQEIDYVAVNDEDFHFVVNMPNLKRPILFIG 135
>SB_48373| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 194 TWRFVHLPVNQGDLGSFIVVCNNASDFHFMVEIVPLARPLPYAG 63
TWR + + + +L V N DFHF+V + L RP+ + G
Sbjct: 265 TWR-LDVAEDLNNLQEIDYVAVNDEDFHFVVNMPNLKRPILFIG 307
>SB_53339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 894
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Frame = +3
Query: 354 YQPTLATDMGNMQERITTTKA--GSITSVQ----AVYVPADDLTDPAPATTFAHLDATT 512
YQ A + N ERIT + GS + ++++P DDLTD A T +A T
Sbjct: 575 YQQMRAETLENEVERITRSSCYDGSEDEIDGSKASLHIPEDDLTDAAVTITQQQTEALT 633
>SB_22113| Best HMM Match : WD40 (HMM E-Value=1.4)
Length = 509
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/95 (22%), Positives = 44/95 (46%)
Frame = -3
Query: 493 ANVVAGAGSVRSSAGTYTACTLVMEPALVVVIRSCILPMSVASVGWYPTADGILPSKADT 314
A + A + R + G+ +L ++ +IR ++ + + V I PS +
Sbjct: 409 AMFIVAAFTTRHTKGSVPGVSLGRNAEVLGIIREMLVLIRIWGVATPSIVPSITPSAGTS 468
Query: 313 SDPACVNLKILSINNSTSCPSLSLKCSASVNPVRA 209
+DP+ + L+I ++ + PS S KC + + +A
Sbjct: 469 NDPSLL-LRIRKTHSPSYSPS-SQKCGITASLQKA 501
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 304 PGQRYRPCLGGYHPLSGTSQHWPRTWVICRNVSPPLKLAPSRA-CRQY 444
PG R GG +P+S TW++ RN+SP RA C+QY
Sbjct: 1421 PGPRMGSGRGGANPMS--------TWLVLRNLSPRADPTAMRAVCQQY 1460
>SB_59275| Best HMM Match : CopB (HMM E-Value=7.9)
Length = 216
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -1
Query: 177 SARKPRRPWKFYSX-XXXXXXLSFHGRDRSPRASSPLRRQKQRIHRE-LSPHCL 22
S KPRRPW+++S + G + P K RI E L+P CL
Sbjct: 137 SVAKPRRPWQYFSANRGSAVVVRVDGGNNILIKPQPKSAVKYRIRGERLTPPCL 190
>SB_56032| Best HMM Match : zf-CCHC (HMM E-Value=0.00047)
Length = 632
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 81 TREGNDLYHEMKVGGVITDDYKTSKVSLVYGQMNEPPGARARVALTGLTLAEHFRDKE 254
T EGN Y + GGV + D ++++ + ++ R + + GL +H ++ E
Sbjct: 561 TPEGNYRYRRLAFGGVNSQDLFDAEMNRILSELQRVLNNRDDILIGGLNEDDHNKNVE 618
>SB_33610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 232 QSISETRRDR-MYCYLLIISSDSRRPGQRYRPCLGGYHPLSGTSQHW 369
Q S TR D + L+ SSD R QR P +GG L+ + +W
Sbjct: 231 QDRSRTRADDPAWEVYLMQSSDPLRIAQRANPAIGGQRRLTRENDNW 277
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 387 MQERITTTKAGSITSVQAVYVPADDLTD-PAPATTFAHLDAT 509
+Q TTT +GS + VQ V VP+ L + P+P T H D T
Sbjct: 103 LQSSSTTTMSGSFSGVQRVRVPSRLLKEIPSPLDT--HHDYT 142
>SB_22693| Best HMM Match : DUF1042 (HMM E-Value=0.00027)
Length = 2261
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +3
Query: 240 FRDKEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPT-LATDMGNMQERITTTKA 416
F D LL N+ + + S+ R S QP A +GN+ + + T+
Sbjct: 2168 FADTSSDPPLLDYVNMLMYFASDSDPLEGFLRALSITAAQPMPSAASLGNIPQSLPETQG 2227
Query: 417 GSITSVQAVYVPADDLTD 470
GS+ +QA++ L D
Sbjct: 2228 GSLPEIQALHHGESKLGD 2245
>SB_7135| Best HMM Match : MBOAT (HMM E-Value=0.0021)
Length = 355
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 397 VSPPLKLAPSRACRQYTSQPMT*LTQ 474
V PP LA SR CRQ + QP + + Q
Sbjct: 17 VRPPFCLAGSRICRQKSRQPASTIRQ 42
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 399 YVPAYYPCPWPVLAGTRQRMVSSQARPIP 313
++PA+ P WPV A TR RP+P
Sbjct: 537 HLPAHLPLEWPVPAVTRLPTHLPLERPVP 565
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 382 VICRNVSPPLKLAPSRACR 438
VICRN+ PLKL P ACR
Sbjct: 357 VICRNLFKPLKLTP--ACR 373
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,658,199
Number of Sequences: 59808
Number of extensions: 471452
Number of successful extensions: 1197
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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