Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_C06
(566 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23) 33 0.12
SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1) 33 0.16
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.50
SB_28490| Best HMM Match : Peptidase_C48 (HMM E-Value=0.51) 29 2.0
SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8) 29 2.0
SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14) 29 2.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018) 29 2.6
SB_7321| Best HMM Match : Corona_NS4 (HMM E-Value=7) 29 2.6
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 29 2.6
SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083) 29 3.5
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23) 28 6.1
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094) 28 6.1
SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023) 27 8.1
SB_31969| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 8.1
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.1
SB_4156| Best HMM Match : Ets (HMM E-Value=0) 27 8.1
>SB_22958| Best HMM Match : RasGAP_C (HMM E-Value=0.23)
Length = 1178
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 84 RYPEYYKFSKQARHPRDVTWDKNIGNGKV 170
R+P+ YK+ KQ RHP +DK + K+
Sbjct: 1080 RHPDMYKYDKQVRHPDMYKYDKQVAEIKI 1108
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 84 RYPEYYKFSKQARHPRDVTWDKNI 155
R+P+ YK+ KQARHP +DK +
Sbjct: 1008 RHPDLYKYDKQARHPDLCKYDKQV 1031
Score = 31.5 bits (68), Expect = 0.50
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 84 RYPEYYKFSKQARHPRDVTWDKNI 155
R+P+ YK+ KQ RHP +DK +
Sbjct: 960 RHPDLYKYDKQVRHPDLCKYDKQV 983
Score = 30.7 bits (66), Expect = 0.87
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = +3
Query: 42 CVY-AQVSMPPSYK----ERYPEYYKFSKQARHPRDVTWDKNI 155
C Y QV P YK R+P+ K+ KQ RHP +DK +
Sbjct: 1001 CKYDKQVRHPDLYKYDKQARHPDLCKYDKQVRHPDMYKYDKQV 1043
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Frame = +3
Query: 42 CVY-AQVSMPPSYKE----RYPEYYKFSKQARHPRDVTWDKNI 155
C Y QV P YK R+P+ K+ KQ RHP +DK +
Sbjct: 953 CKYDKQVRHPDLYKYDKQVRHPDLCKYDKQVRHPDMCKYDKQV 995
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 84 RYPEYYKFSKQARHPRDVTWD 146
R+P+ YK+ KQ RHP +D
Sbjct: 1032 RHPDMYKYDKQVRHPDMCKYD 1052
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 84 RYPEYYKFSKQARHPRDVTWD 146
R+P+ YK+ KQ RHP +D
Sbjct: 1056 RHPDMYKYDKQVRHPDMCKYD 1076
Score = 28.3 bits (60), Expect = 4.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 84 RYPEYYKFSKQARHPRDVTWDKNI 155
R+P+ K+ KQ RHP +DK +
Sbjct: 984 RHPDMCKYDKQVRHPDMCKYDKQV 1007
Score = 27.9 bits (59), Expect = 6.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 84 RYPEYYKFSKQARHPRDVTWDKNI 155
R+P+ K+ KQ RHP +DK +
Sbjct: 948 RHPDLCKYDKQVRHPDLYKYDKQV 971
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +3
Query: 42 CVY-AQVSMPPSYKE----RYPEYYKFSKQARHPRDVTWDKNI 155
C Y QV P YK R+P+ K+ Q RHP +DK +
Sbjct: 1025 CKYDKQVRHPDMYKYDKQVRHPDMCKYDIQVRHPDMYKYDKQV 1067
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Frame = +3
Query: 42 CVY-AQVSMPPSYKE----RYPEYYKFSKQARHPRDVTWDKNI 155
C Y QV P YK R+P+ K+ Q RHP +DK +
Sbjct: 1049 CKYDIQVRHPDMYKYDKQVRHPDMCKYDIQVRHPDMYKYDKQV 1091
>SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)
Length = 798
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -2
Query: 331 QSNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYP--ALPNNPSSFCPSVP 173
++N+ + VSP+ PK V +CP N P S LKN P LP + + P +P
Sbjct: 611 KNNMKTEPIVSPSIPKNTVSTSCPGN-PPSILKNSSAVPPNGLPESKPAPIPVIP 664
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 31.9 bits (69), Expect = 0.38
Identities = 26/102 (25%), Positives = 42/102 (41%)
Frame = -2
Query: 436 VFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPS 257
+F+ + H P F PP ++ Q + PP P P + P A +
Sbjct: 163 LFILRQHPSYPPTQPF-YPPTQPFYPPTPSSYPPTQPSYPPTAPSYPPTPSSYPPIA--A 219
Query: 256 NLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTS 131
+ P ++ P+ P PSS+ P+ P+ P FLS T+
Sbjct: 220 SYPPTAPSYNPTAPSYPPTPSSYPPTQPSHPPTAPFLSSDTT 261
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = -2
Query: 370 LLISRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS 191
LLI R L + PP P P + +P P P + P+ P PSS
Sbjct: 493 LLILRHNLLILRQHPSYPPTQPSYPPTPSSYLPTQ-PYYPPPQPYPPTQ--PSYPPTPSS 549
Query: 190 FCPSVPNTFPLPMFLSHVTSL 128
+ P+ P+ P FLS T+L
Sbjct: 550 YPPTQPSYPPTAPFLSADTTL 570
>SB_13184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1297
Score = 31.5 bits (68), Expect = 0.50
Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Frame = +3
Query: 156 GNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTS-NFGGRLDW 332
G G FGT GLFG AG G + G +G PA S FGG
Sbjct: 50 GFGSGFGTTQTTGTGLFGAAGTNTGTGLFGGGTVTGSMFGQ----PASAASTGFGGFGST 105
Query: 333 SNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSAGGSLSTMGRGKPDVAFQGPIS 512
+ N + G + +G G++ T+ +A G ST G G F P +
Sbjct: 106 AGTNTGGLFGNTAASG-----TTTGTGLFG---QTQGAAFGGTSTSGFGTSGSLFSAPST 157
Query: 513 ST 518
ST
Sbjct: 158 ST 159
>SB_28490| Best HMM Match : Peptidase_C48 (HMM E-Value=0.51)
Length = 483
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 286 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFP 161
KT +C S+ + + + C V+ LP+ + S+F P +P + P
Sbjct: 105 KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPMIPYSLP 148
>SB_24703| Best HMM Match : Disintegrin (HMM E-Value=0.8)
Length = 640
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 286 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFP 161
KT +C S+ + + + C V+ LP+ + S+F P +P + P
Sbjct: 505 KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPMIPYSLP 548
>SB_10621| Best HMM Match : Peptidase_M24 (HMM E-Value=4.3e-14)
Length = 708
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 244 SSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTS 131
SS + V P L N + +CP+VPN PLP FL + S
Sbjct: 376 SSSSDTPVSPVL-NASTQYCPTVPNK-PLPSFLPALQS 411
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = -2
Query: 316 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLP 155
P ++P+ P T ++ PS S + P+ P+ PS+ PS P+T P
Sbjct: 48 PSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPST--PSTPSTPSTP 99
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 301 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS-FCPSVPNTFPLPM 152
+P+ P T + PS S + P++PN PS+ PS P+T P+
Sbjct: 191 TPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPI 241
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 301 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS-FCPSVPNTFPLPM 152
+P+ P T + PS S + P++PN PS+ PS P+T P+
Sbjct: 741 TPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLSTPI 791
Score = 28.3 bits (60), Expect = 4.6
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 301 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS-FCPSVPNTFPLP 155
+P+ P T + PS SL + P+ P+ PS+ PS+PNT P
Sbjct: 654 TPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNTPSTP 703
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = -2
Query: 316 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLS 143
P +P+ P T + PS S + + P P+ PS+ PS P T P LS
Sbjct: 132 PSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPST--PSAPGTPITPSTLS 187
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = -2
Query: 301 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTSL 128
+P+ P T + PS S+ + P+ P+ PS+ PS P+T + L H+ L
Sbjct: 529 TPSTPSTPSTPSTPSTPSTPSMPSTPSTPSTPSTPST--PSTPSTLVHLVHLVHLVHL 584
>SB_12635| Best HMM Match : Chlam_PMP (HMM E-Value=0.018)
Length = 3561
Score = 29.1 bits (62), Expect = 2.6
Identities = 34/117 (29%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
Frame = +3
Query: 144 DKNIGNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKL-EGQAYGTRVLGPAGDTSNFGG 320
+K IG G G G G G+ G G L E +G+ GP G N GG
Sbjct: 1685 NKGIGKGTEPGGSGGGHGGTGGR-GRNAPIVGLAYGNLYEPTEFGSSGGGPVGTPGNGGG 1743
Query: 321 RLDWSNKNANAALDISKQIGGRPNLSASGAG-VWNFDKNTRLSAG-GSLSTMGRGKP 485
RL + N +D G L G G V + + + G GS+ G G P
Sbjct: 1744 RL-FLNVTFLLEIDGILSANGADGLPQGGGGSVGSIWVHCNIIKGYGSIRANGGGSP 1799
>SB_7321| Best HMM Match : Corona_NS4 (HMM E-Value=7)
Length = 139
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 286 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFP 161
KT +C S+ + + + C V+ LP+ + S+F P +P + P
Sbjct: 32 KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPVIPYSLP 75
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 29.1 bits (62), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -2
Query: 286 KTLVPYACPSNLPRSSLKNCRVYPALPN--NPSSFCPSVPNTFPLPMF 149
KT +C S+ + + + C V+ LP+ + S+F P +P F LP +
Sbjct: 362 KTATSNSCTSSTSKETTQQCDVHMGLPHGLDTSTFVPVIP--FSLPQY 407
>SB_46131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 28.7 bits (61), Expect = 3.5
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 144 DKNIGNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGR 323
+ N GN F + N + G +G + G GQA T G G+T NFGG+
Sbjct: 305 NSNYGNYSNFSSDNGNYNNFSGSSGNQMGGGVVNSGNFGGQA-NTGNFGGQGNTGNFGGQ 363
Query: 324 LDWSNKN 344
+ +N
Sbjct: 364 QAMNTQN 370
>SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)
Length = 440
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = -2
Query: 316 PKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMF 149
P+F P VPY+ P P L N PSS P P+P+F
Sbjct: 366 PQFMQQPPTLSQGVPYSMPPRPGAPGTMPTGPVPLLGNPPSSQAPPARGPRPMPLF 421
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 28.7 bits (61), Expect = 3.5
Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Frame = -2
Query: 547 LKTTTSALEIVLEIGPWNATSGFPRPIVLSDPPADKRVFLSKFHTPAPLADRFGLPPICL 368
+K SAL + + P N FP P ++ PP + H P P+ +PP L
Sbjct: 339 VKNIDSALHKPVIVPPPNLLFSFPPPPIIPIPPPAMPAMFNP-HVPPPMIGPVTVPPPPL 397
Query: 367 LISRAAF--AFLLDQSNLPPKFEVSPAGPKTLVPYACPSNLP 248
+ A + Q+ PP P G P+N P
Sbjct: 398 IPPPQASIPPPTMIQTLPPPSVPPPPIGVPNRPSVLYPNNNP 439
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.3 bits (60), Expect = 4.6
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Frame = +3
Query: 156 GNGKVFGTLGQNDDGLFGKAGYTRQFFNDDRGKLEGQAYGTRVLGPAGDTSNFGGRLDWS 335
G+G ++ G NDD FG +G FNDD +G G +N+ ++ +
Sbjct: 314 GHG-LYSNDGNNDDAHFGDSG-RHDNFNDDISN-DGNLNGGGANNNNNKNNNYNSGINNN 370
Query: 336 NK---NANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSAGGSLSTMGRGK 482
N N+ ++ + G N S G F N + G+ + G K
Sbjct: 371 NNNNYNSGSSNGRNTNNGNNNNAGTSNVGNNGFTNNGVNNNNGNSNNGGNDK 422
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 328 SNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYP-ALPNNPSSFCPSVPNTFP 161
++ P F + G L P P N P S R++ PN P F + PN+FP
Sbjct: 1064 NSFPNIFRMHTLGEPNL-PEHFPENYPNSFPNIFRMHTLGEPNLPEHFTENYPNSFP 1119
>SB_6794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 27.9 bits (59), Expect = 6.1
Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 9/109 (8%)
Frame = +3
Query: 123 HPRDVTWDKNIGN----GKVFGTLGQNDDGLFGKAGYT--RQFFN---DDRGKLEGQAYG 275
H + + D+ +G+ GK +G LG + F ++ YT R+++N + + + +
Sbjct: 285 HEQALKIDQELGDRRAEGKSYGNLG---NAAFARSDYTKAREYYNKCLEIAVQFDSKQDQ 341
Query: 276 TRVLGPAGDTSNFGGRLDWSNKNANAALDISKQIGGRPNLSASGAGVWN 422
V G+T F + ++ ALD+++ IG R +++ G+ N
Sbjct: 342 WMVYHSLGNTFYFQDDFRQALEHQKKALDVARAIGARGGEASALGGIGN 390
>SB_55417| Best HMM Match : Kelch_2 (HMM E-Value=4.8e-23)
Length = 1153
Score = 27.9 bits (59), Expect = 6.1
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 337 LDQSNLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPS 194
L S++PP SPA P A P SS + +PA PN P+
Sbjct: 331 LKGSSIPPSPNRSPAASPAPSPSAVKPFHPVSSAPSAIKFPAKPNVPA 378
>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
Length = 1671
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -2
Query: 289 PKTLVPYACPSNLPRSSLKNCRVYPALPNN-PSSFCPSVPNTFPLP 155
P P + P P +S+ ++P P++F PS P P P
Sbjct: 1023 PTKSTPTSMPRKTPNTSMPTKSTPTSMPRKTPNTFIPSTPQVGPTP 1068
>SB_8718| Best HMM Match : Lipase_GDSL (HMM E-Value=0.023)
Length = 836
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -2
Query: 325 NLPPKFEVSPAGPKTLVPYACPSNLPRSSLKNCRVYPALPN 203
+LP +E+ P +LV Y SN R + +++P LP+
Sbjct: 361 SLPDDYELDVPSP-SLVDYVISSNRVRQKFQFLKIHPLLPH 400
>SB_31969| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 655
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -3
Query: 192 HFVRVYRILFRCLCSC 145
HF R YR + R LCSC
Sbjct: 639 HFRRAYRRMLRALCSC 654
>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -2
Query: 271 YACPSNLPRSSLKNCRVYPALPNNPSSFCPSVPNTFPLPMFLSHVTSLG 125
Y CP + CR LP+ S+F PS + +P L T+LG
Sbjct: 9 YRCPCPSSECNGAICRYPEVLPSPASTFSPSSCSFYPPERKLVPFTALG 57
>SB_4156| Best HMM Match : Ets (HMM E-Value=0)
Length = 516
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -2
Query: 301 SPAGPKTLVPYACPSNLPRSSLKNCRVYPALPNNPSS 191
S P ++ +C + P SSL + R +P + +NP++
Sbjct: 243 SALAPASVSTQSCTAYTPTSSLYDSRPHPVITSNPNA 279
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,366,541
Number of Sequences: 59808
Number of extensions: 488930
Number of successful extensions: 1339
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1337207630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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