Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0001_A05
(410 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 223 6e-59
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 158 2e-39
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 1e-37
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 149 7e-37
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 145 1e-35
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 128 2e-30
SB_14708| Best HMM Match : IF-2B (HMM E-Value=0) 30 0.65
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09) 28 3.4
SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1) 27 6.0
SB_42811| Best HMM Match : SRCR (HMM E-Value=0) 27 6.0
SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 27 6.0
SB_8684| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_6710| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_3499| Best HMM Match : HAT (HMM E-Value=4.2) 27 7.9
SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 27 7.9
SB_35034| Best HMM Match : ENTH (HMM E-Value=0) 27 7.9
SB_12404| Best HMM Match : IncA (HMM E-Value=0.027) 27 7.9
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 223 bits (544), Expect = 6e-59
Identities = 109/116 (93%), Positives = 112/116 (96%)
Frame = +1
Query: 1 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKV QGEREMA DNKL
Sbjct: 202 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKL 261
Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVIQSSGGLSK 348
LGQF LVGIPPAPRGVPQ+EV FDIDANGIV+VSARDKGTG+EQQIVIQSSGGLSK
Sbjct: 262 LGQFQLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDKGTGREQQIVIQSSGGLSK 317
Score = 31.5 bits (68), Expect = 0.28
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 347 RDEIENMVKAAEQFAATDKQR 409
+D IENM+K AE++A DKQ+
Sbjct: 317 KDAIENMIKEAEKYAEADKQK 337
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 158 bits (383), Expect = 2e-39
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 1 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
V PL+LGIET+GGV TKLI+RNT IPTKKSQVFSTAAD Q V I+V +GER M DN
Sbjct: 1091 VNPLTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTKDNHP 1150
Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI 324
LG+F L GIPPAPRGVPQIEV F+ID NGI+ VSA DKGTG +++I I
Sbjct: 1151 LGKFDLNGIPPAPRGVPQIEVTFEIDVNGILRVSAEDKGTGNKEKITI 1198
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 152 bits (368), Expect = 1e-37
Identities = 73/117 (62%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Frame = +1
Query: 1 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
V PL+LG+ET GGV T I RNTTIPTK++Q F+T +D QT V I+V++GER + DN L
Sbjct: 490 VAPLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTKDNNL 549
Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI-QSSGGLSK 348
LG+F L GIPPAPRGVPQI+V FD+D+NGI++VSA DK TGKE +I I G LSK
Sbjct: 550 LGKFELSGIPPAPRGVPQIDVTFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSK 606
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 149 bits (362), Expect = 7e-37
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 1/117 (0%)
Frame = +1
Query: 1 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
V PLS+GIET GGV + LI RN+TIPTK++Q F+T +D Q V I+V +GER M N L
Sbjct: 398 VAPLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTAHNNL 457
Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI-QSSGGLSK 348
LG+F L GIPPAPRGVPQIEV FDIDANGI++VSA DK TGKE +I I G LSK
Sbjct: 458 LGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 514
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 145 bits (351), Expect = 1e-35
Identities = 74/117 (63%), Positives = 84/117 (71%), Gaps = 1/117 (0%)
Frame = +1
Query: 1 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
V PLSLGIET G V TKLI RN IPTK +Q F+T +D Q V I+V +GER + N L
Sbjct: 397 VAPLSLGIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTKHNNL 456
Query: 181 LGQFSLVGIPPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQIVI-QSSGGLSK 348
LG+F L GIPPAPRGVPQIEV FDIDANGI++VSA+DK TGK I I G LSK
Sbjct: 457 LGKFDLSGIPPAPRGVPQIEVTFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSK 513
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 128 bits (308), Expect = 2e-30
Identities = 63/66 (95%), Positives = 63/66 (95%)
Frame = +1
Query: 1 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKL 180
VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKV QGEREMA DNKL
Sbjct: 147 VTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAIDNKL 206
Query: 181 LGQFSL 198
LGQF L
Sbjct: 207 LGQFQL 212
>SB_14708| Best HMM Match : IF-2B (HMM E-Value=0)
Length = 350
Score = 30.3 bits (65), Expect = 0.65
Identities = 20/95 (21%), Positives = 38/95 (40%)
Frame = +1
Query: 34 GGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKLLGQFSLVGIPP 213
G K+ T + K ++ A T ++ + G+ + + L S+ GIP
Sbjct: 247 GDTANKIGTYQLALAAKHHEIPFYVAAPVTSIDFSLVNGDAIVIEERSPLELTSVKGIPV 306
Query: 214 APRGVPQIEVCFDIDANGIVHVSARDKGTGKEQQI 318
A G+ FD+ G++ + GT Q++
Sbjct: 307 AASGIGVWNPAFDVTPAGLITGIVTEHGTFSPQEM 341
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 29.5 bits (63), Expect = 1.1
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +1
Query: 40 VFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMATDNKLLGQFSLVGIPPAP 219
VFT+ I TTIP + S A T +I ++ T LG+FS+V
Sbjct: 4987 VFTQEIY-TTTIPENMASGASVARVATTDRDIGINANHTYSITGGDGLGKFSIVQSTGVI 5045
Query: 220 RGVPQIEVCFDIDANGIVHVSARDKGT 300
+P ++ ++ + ++ARD+G+
Sbjct: 5046 TALPGLD--YETKYTYYLSITARDRGS 5070
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 374 PSPCSRSRPLDRPPDDWITICCSFPVPLSRADTWTMPFASMSKQTSIWGTP 222
PSP ++ P + T S P+P + +W+ P S +T+ W +P
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSP--SPKYKTTSWTSP 129
>SB_48236| Best HMM Match : DNA_pol_B_2 (HMM E-Value=8.6e-09)
Length = 1396
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 36 WCLHEADHQEHHDTY*EESGVLHGGRRADPGRDQGAP 146
WC EAD +++ D Y GV R DPG+ + P
Sbjct: 1122 WCTTEADKRQYVDDYERHQGV-----RMDPGKIEKNP 1153
>SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1)
Length = 114
Score = 27.1 bits (57), Expect = 6.0
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 37 GVFTKLITRNTTIPT--KKSQVFSTAADGQTQVEIKVHQGERE 159
G F+ +T + T P S VFSTAA T V K + E E
Sbjct: 32 GTFSATVTPSKTSPVAMSTSAVFSTAAARPTTVNTKKQKEEEE 74
>SB_42811| Best HMM Match : SRCR (HMM E-Value=0)
Length = 854
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +1
Query: 94 VFSTAADGQTQVEIKVHQGEREMATDNKLLGQFSLVGI 207
V T DG+ V +K E+ +A DN +G F +VG+
Sbjct: 730 VVKTTNDGKIVV-VKKDSIEKSIAEDNSAIGGFPVVGV 766
>SB_1939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = -1
Query: 290 SRADTWTMPFASMSKQ--TSIWGTPRGAGGIPTSEN 189
S+ + T+P ++ + +S W + R +GG+P SEN
Sbjct: 405 SKNSSETVPVGTIGSKPPSSNWNSNRNSGGLPLSEN 440
>SB_42486| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1554
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 382 FGCLHHVLDLVPWTDRPTTGSRSAAPS 302
F C + WT RP TGS S PS
Sbjct: 149 FTCSSATHTTLKWTKRPKTGSESDVPS 175
>SB_8684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 398
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 30 TRWCLHEADHQEHHDTY*EESGV 98
TRWC ++ D H +TY +G+
Sbjct: 274 TRWCNYQRDKASHRNTYKHGAGL 296
>SB_6710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 26.6 bits (56), Expect = 7.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 296 PLSRADTWTMPFASMSKQTSIWGTPRGAGGIP 201
PLS D F+++S Q + G P G G+P
Sbjct: 79 PLSTIDHSKFFFSTLSAQNAATGCPNGTEGLP 110
>SB_3499| Best HMM Match : HAT (HMM E-Value=4.2)
Length = 376
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 36 WCLHEADHQEHHDTY*EESGVLHGGRRADPGRDQGAP 146
WC +AD +++ D Y GV R DPG+ + P
Sbjct: 144 WCTTDADKRQYVDDYERHQGV-----RMDPGKIEKNP 175
>SB_50230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 26.6 bits (56), Expect = 7.9
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 208 PPAPRGVPQIEVCFDIDANGIVHVSARDKGTGKEQ 312
PP P P+ E D+D H + R K TGK Q
Sbjct: 50 PPPPVPEPEPEPDLDLDLPVPPHETPRPKKTGKRQ 84
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 26.6 bits (56), Expect = 7.9
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +1
Query: 25 ETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGEREMA 165
E+ GG+F+KL R+ T P K ++ + +++ K G A
Sbjct: 2473 ESEGGLFSKLGLRHPTEPPGKQKIIRQVSKSESEAGPKTGTGNESRA 2519
>SB_35034| Best HMM Match : ENTH (HMM E-Value=0)
Length = 455
Score = 26.6 bits (56), Expect = 7.9
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = -1
Query: 284 ADTWTMPFASMSKQTSIWGTP---RGAGGIPTSENCPSSLLSVAISRS 150
AD W P A+ WG P AG P S S+++ A+S S
Sbjct: 256 ADPWGAPQAAAPVAADPWGAPAPVSSAGSNPWSSTNGQSIIAPAVSIS 303
>SB_12404| Best HMM Match : IncA (HMM E-Value=0.027)
Length = 283
Score = 26.6 bits (56), Expect = 7.9
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +1
Query: 43 FTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVHQGERE 159
F K +T NTT P + + S + + + + K ++G+R+
Sbjct: 5 FVKELTHNTTQPDPEQSIRSKGFEEELKAKQKTYRGKRK 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,902,401
Number of Sequences: 59808
Number of extensions: 198941
Number of successful extensions: 572
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 752487277
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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