Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_C08
(859 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 260 8e-70
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 260 8e-70
SB_56| Best HMM Match : Actin (HMM E-Value=0) 260 8e-70
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 260 8e-70
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 259 2e-69
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 141 6e-34
SB_54| Best HMM Match : Actin (HMM E-Value=0) 127 1e-29
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 113 2e-25
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 2e-21
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 84 2e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 82 5e-16
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 43 4e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 39 0.005
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 35 0.074
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 33 0.30
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.91
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 31 0.91
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.91
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 31 1.2
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.6
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 31 1.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 2.1
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 260 bits (638), Expect = 8e-70
Identities = 121/135 (89%), Positives = 125/135 (92%)
Frame = +1
Query: 244 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 424 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 603
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 604 GVSHTXPHLRGIRTP 648
GV+HT P G P
Sbjct: 159 GVTHTVPIYEGYALP 173
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 256
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +3
Query: 615 HRAPSTRDTHSPHAIXXXXXXXXXXXXYLMKILTERGYS 731
H P PHAI YLMKILTERGYS
Sbjct: 162 HTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 200
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 260 bits (638), Expect = 8e-70
Identities = 121/135 (89%), Positives = 125/135 (92%)
Frame = +1
Query: 244 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 424 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 603
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 604 GVSHTXPHLRGIRTP 648
GV+HT P G P
Sbjct: 158 GVTHTVPIYEGYALP 172
Score = 68.1 bits (159), Expect = 9e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 134 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 256
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +3
Query: 615 HRAPSTRDTHSPHAIXXXXXXXXXXXXYLMKILTERGYS 731
H P PHAI YLMKILTERGYS
Sbjct: 161 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 260 bits (638), Expect = 8e-70
Identities = 121/135 (89%), Positives = 125/135 (92%)
Frame = +1
Query: 244 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 424 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 603
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 604 GVSHTXPHLRGIRTP 648
GV+HT P G P
Sbjct: 158 GVTHTVPIYEGYALP 172
Score = 69.3 bits (162), Expect = 4e-12
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +2
Query: 134 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 256
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +3
Query: 615 HRAPSTRDTHSPHAIXXXXXXXXXXXXYLMKILTERGYS 731
H P PHAI YLMKILTERGYS
Sbjct: 161 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 260 bits (638), Expect = 8e-70
Identities = 121/135 (89%), Positives = 125/135 (92%)
Frame = +1
Query: 244 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 424 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 603
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 604 GVSHTXPHLRGIRTP 648
GV+HT P G P
Sbjct: 159 GVTHTVPIYEGYALP 173
Score = 75.4 bits (177), Expect = 6e-14
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +3
Query: 615 HRAPSTRDTHSPHAIXXXXXXXXXXXXYLMKILTERGYS 731
H P PHAI YLMKILTERGYS
Sbjct: 162 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 259 bits (635), Expect = 2e-69
Identities = 120/127 (94%), Positives = 123/127 (96%)
Frame = +1
Query: 244 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 423
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 424 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 603
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 604 GVSHTXP 624
GVSHT P
Sbjct: 159 GVSHTVP 165
Score = 70.9 bits (166), Expect = 1e-12
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +2
Query: 128 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 256
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 141 bits (342), Expect = 6e-34
Identities = 64/124 (51%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Frame = +1
Query: 280 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 456
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 457 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPHLRG 636
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P G
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 637 IRTP 648
P
Sbjct: 173 FALP 176
Score = 36.3 bits (80), Expect = 0.032
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 146 AALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 241
+ +V DNG+G K G+AG + P +FPS G+
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGR 38
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 127 bits (306), Expect = 1e-29
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +1
Query: 382 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 561
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 562 ASGRTTGIVLDSGDGVSHTXPHLRGIRTP 648
ASGRTTG V D GDGVSHT P G P
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLP 2217
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +2
Query: 152 LVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 241
+V+DNGSG CKAG + D++PR VFP+ G+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGR 2126
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 113 bits (272), Expect = 2e-25
Identities = 48/73 (65%), Positives = 61/73 (83%)
Frame = +1
Query: 430 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 609
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 610 SHTXPHLRGIRTP 648
SH+ P G P
Sbjct: 186 SHSVPIYEGFAMP 198
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 100 bits (239), Expect = 2e-21
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +1
Query: 244 PAIRXVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 402
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 91.5 bits (217), Expect = 8e-19
Identities = 43/58 (74%), Positives = 48/58 (82%)
Frame = +1
Query: 475 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPHLRGIRTP 648
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT P G P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 135
Score = 69.3 bits (162), Expect = 4e-12
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +2
Query: 134 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGKAPPSG 256
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPS G+ G
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +3
Query: 615 HRAPSTRDTHSPHAIXXXXXXXXXXXXYLMKILTERGYS 731
H P PHAI YLMKILTERGYS
Sbjct: 124 HTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 162
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 83.8 bits (198), Expect = 2e-16
Identities = 34/87 (39%), Positives = 59/87 (67%)
Frame = +1
Query: 340 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 519
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 520 PAMYVAIQAVLSLYASGRTTGIVLDSG 600
PA ++ +VL+ +A+GR+ G+V+DSG
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSG 89
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 82.2 bits (194), Expect = 5e-16
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = +1
Query: 496 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTXPHLRGIRTP 648
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH P G P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALP 51
Score = 33.1 bits (72), Expect = 0.30
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 615 HRAPSTRDTHSPHAIXXXXXXXXXXXXYLMKILTERGYS 731
H P PHAI YLMK++TERGYS
Sbjct: 40 HNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYS 78
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +1
Query: 268 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 447
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 577 TGIVLDSGDGVSHTXP 624
TG V+DSGDGV+H P
Sbjct: 356 TGCVIDSGDGVTHVIP 371
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +2
Query: 137 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSNRGK 241
E LV+D GS M K GFAGDDAP+ VFP G+
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGR 1388
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 385 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 564
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 565 SGRTTGIV 588
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 39.1 bits (87), Expect = 0.005
Identities = 17/36 (47%), Positives = 23/36 (63%)
Frame = +2
Query: 122 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPS 229
FK+ A+V+DNG G+ K GFAGD PR + P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPA 728
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 541 QAVLSLYASGRTTGIVLDSG 600
Q LSLYASG T G+ L SG
Sbjct: 767 QLSLSLYASGMTLGVCLSSG 786
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 37.9 bits (84), Expect = 0.010
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = -1
Query: 226 GEHGARSIISCETGLAHTGAIVYYQRGNFFV 134
GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 9 GENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 35.1 bits (77), Expect = 0.074
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 8/124 (6%)
Frame = +1
Query: 289 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 462
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 463 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTXP 624
+ M +I+FE +N A+ A LS Y S +V+D+G +H P
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 625 HLRG 636
G
Sbjct: 373 VFNG 376
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 133 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCSCSTQSS 2
A L L+KL CRC K +R + + + IP C C+++ S
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSEDS 1339
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/76 (32%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +2
Query: 521 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPXPIYEGYALPPRHXASGL-XRSRPHRL 697
PP P P + TRP VP +T PTP P ALPP A+ + P
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPP--PTSALPPPIPATQVPPPPLPPLP 976
Query: 698 PHEDPHRARLLXSLPP 745
P P + +LPP
Sbjct: 977 PPPPPVQTTTAPTLPP 992
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 512 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVS-PTPXPIYEGYALPPRHXASGLXRSRP 688
+T T+P+K S T+PV+ P TPA ++ P PI PP R++P
Sbjct: 125 TTSTTATTPAKTTSATTKPVMTPT---TPAPMTLPPISPIDPPRTQPPPIFPIDPPRTQP 181
Query: 689 HRLPHEDPHRAR 724
+P DP R +
Sbjct: 182 PPIPPIDPPRTQ 193
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = +2
Query: 521 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPXPIYEGYALPPRHXASGLXRSRPHRLP 700
PP +P+ P P PP PA +P P P PP A + PH LP
Sbjct: 57 PPAAAPAAPPPPAAAPAAPPPPAAPPA--APPPPPPLPAPPPPPAQPAPQPPPAPPHFLP 114
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.91
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 331 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 483
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.91
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 225 GNTARGASSPAKPALHIPEPLSTT 154
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.91
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 472 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 588
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 31.5 bits (68), Expect = 0.91
Identities = 22/86 (25%), Positives = 29/86 (33%)
Frame = +2
Query: 395 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 574
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 575 PPVSCWTPATVSPTPXPIYEGYALPP 652
P + TP T + TP A PP
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPP 170
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.91
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 225 GNTARGASSPAKPALHIPEPLSTT 154
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 508 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTXPHLRG 636
++ T A+ + S RT TG V+DSGDGV+H P G
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEG 81
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -3
Query: 617 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 465
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 464 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 300
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 509 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 619
H+T P P T PS P C + P C+T T+SP P
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKP 701
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 225 GNTARGASSPAKPALHIPEPLSTT 154
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 121 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCSC 17
L++L C C+K + KR + + Q+P C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQC 654
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 456 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 548
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 2.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 536 PSKPCSRCTRPVVPP 580
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = +2
Query: 500 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTP 619
C+K T PCT PC+ CT+ +P +TP T TP
Sbjct: 761 CTKRYT--PCTERYTPCTERYTPCTKRYIPFAKRYTPCTERYTP 802
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +2
Query: 527 CTSP--SKPCSRCTRPVVPPVSCWTPA-TVSPTPXPIYEGYALPPRHXASGLXRSRPHRL 697
C P + PC+ P PPV PA ++P P+ A P H S + H
Sbjct: 1363 CAPPPMADPCATMAAPCAPPVMMAAPAPMLAPMLAPMPAPCAPPECHTHSVQVKQTHHMA 1422
Query: 698 PHEDPHRARLLXSLPP 745
P P A +PP
Sbjct: 1423 PAPPPPMA--FPPMPP 1436
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 460 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 588
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 530 TSPSKPCSRCTRPVVPPVSCWTPATVSPTP 619
+SP KP T+PVVP P+ + P P
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKP 1540
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 611 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 438
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 437 G 435
G
Sbjct: 147 G 147
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 521 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 616
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 225 GNTARGASSPAKPALHIPEPLSTT 154
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 225 GNTARGASSPAKPALHIPEPLSTT 154
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,250,918
Number of Sequences: 59808
Number of extensions: 668044
Number of successful extensions: 2552
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2514
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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