Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20151
         (795 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    29   0.22 
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    28   0.38 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   6.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   8.2  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   8.2  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 28.7 bits (61), Expect = 0.22
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 9   GTWYYFNCCSFAGNLQFIKGPHCYIHSSRDPHR 107
           G+ Y  N C++  N  F+   H   HS   PH+
Sbjct: 124 GSTYMCNYCNYTSNKLFLLSRHLKTHSEDRPHK 156


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 27.9 bits (59), Expect = 0.38
 Identities = 17/69 (24%), Positives = 23/69 (33%)
 Frame = +3

Query: 462 PPCNWLVPKKESWCTRGFRFTPPKQETFFKDDANHDPQWSEEQIISAKFNYNGLLIGRDE 641
           P C+   P K + CT G    P  +     D  N   +W           Y  L    DE
Sbjct: 388 PRCDEQRPHKATTCTEGKSLVPLMERNSTADGENDGDEWIAYSQYPRPGTYPSLFPNSDE 447

Query: 642 HYMRKATIL 668
             +R   I+
Sbjct: 448 PKLRHIKIM 456


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 81  IHSSRDPHRIGSSLHSYLR-SKIAKMSHPKQVGQYK 185
           +    D HR+G+++ +YL+  KI   + P+  G  K
Sbjct: 146 LQDREDKHRLGTAIAAYLQYQKICGSNIPQASGHSK 181


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 772 HPPNNATFCIDS 737
           HPPNN  + +DS
Sbjct: 39  HPPNNGNWAVDS 50


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +3

Query: 96  DPHRIGSSLHSYLRSKIAKMSHPKQVGQYKLGKLLIEGKTK 218
           D  RI ++   +L  ++A MSH + +  ++     ++GK K
Sbjct: 84  DVQRIRTNFKGHLLLELAPMSHQETMTLWREVAAALDGKAK 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,856
Number of Sequences: 2352
Number of extensions: 19356
Number of successful extensions: 77
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)