Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20136
         (781 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   1.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.0  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   4.6  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 403 KHTETCEKNSLPTKDVIEQEKS 468
           K+T TCE  +LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 635 RGCCTPPLPRQCCH 594
           +G C  P PR+CCH
Sbjct: 190 QGRCFGPKPRECCH 203


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = -2

Query: 624 YAAIAQAVLPLYKNKNKTCNGRRKSI*LTSILKYGD 517
           Y  + QAVLPL KN N  CN  R+SI L  I++  D
Sbjct: 536 YIVLVQAVLPLDKNLN-DCN--RQSI-LGRIIRVTD 567


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 215 QTEAQSFHWCRRHGD 171
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,117
Number of Sequences: 2352
Number of extensions: 16132
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)