Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20110
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.8  
DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.       23   6.7  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.7  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    23   8.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = -3

Query: 357  VGVGPEQVAEQALVGHVCRPHDPPDLFHSLQVRRRPP*QQKIFSSTIAATGRQ 199
            V +GP   A  +  G +     P  +      +++PP QQ   +S  A TG+Q
Sbjct: 1331 VPMGPANAAPSSPAGVLVAKVPPVAVEDIENSKQQPPVQQTAATSAAAGTGQQ 1383


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +1

Query: 373 WGENDRGVSFTFGTEVVGKFLSKH--EFDLICR 465
           WG ND+ +    GT+V   ++S+      L CR
Sbjct: 322 WGHNDKRIFIATGTQVHIAWVSRRVASLQLFCR 354


>DQ974171-1|ABJ52811.1|  403|Anopheles gambiae serpin 14 protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = -3

Query: 438 GQELAHDFGSKSEADSAIVLAPAGRVLVGVGPEQVAEQALVGHVCRPHD 292
           G    H F SK  A +A         L  +      +   +GH+ RPHD
Sbjct: 352 GVATVHSF-SKRSAPAAYQFYVGRSFLFALVKRSSKQLLFIGHLYRPHD 399


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
 Frame = +3

Query: 63  LNIPRISFFYAETTSVPV----SIGFMGFTMSAKGGITLNYGRRSQTASTVFPL 212
           + I R + +Y     VP     S+  +GFT+    G  L  G     + TVF L
Sbjct: 225 IQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGLTILVSQTVFSL 278


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +3

Query: 477 RRGWIRVLCEEQLVTLFSAPNYCGEFDNAGALMSVDETL 593
           RRG +     +QL+  ++   +C        L S+ E L
Sbjct: 229 RRGELFYYMHQQLIARYNVDRFCNRLSRVRPLTSLREPL 267


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,374
Number of Sequences: 2352
Number of extensions: 15855
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)