Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20087
         (612 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   1.1  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    26   1.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   5.9  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 160 RRNMSNLLHCHCCPRSWCRCSKTSWTSLTNSKTTTYHHPK 41
           R  + N    H    +W   S++  TS+ +  TTT  HPK
Sbjct: 476 RTALGNRDEPHSSSGNWSASSESGRTSIGSEITTTNTHPK 515


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -3

Query: 160 RRNMSNLLHCHCCPRSWCRCSKTSWTSLTNSKTTTYHHPK 41
           R  + N    H    +W   S++  TS+ +  TTT  HPK
Sbjct: 477 RTALGNRDEPHSSSGNWSASSESGRTSIGSEITTTNTHPK 516


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = -3

Query: 133 CHCCPRSWCRCSKT 92
           CHCC    C C  T
Sbjct: 780 CHCCEFDACDCEMT 793


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,879
Number of Sequences: 2352
Number of extensions: 9784
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)