Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00090
(775 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 41 5e-05
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 40 1e-04
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 39 2e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 37 6e-04
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 34 0.006
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 33 0.010
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 31 0.052
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 29 0.21
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 28 0.28
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 27 0.49
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 27 0.64
Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protei... 26 1.5
AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related ... 26 1.5
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 24 4.5
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 24 6.0
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 40.7 bits (91), Expect = 5e-05
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTGKATRRT-QPHEEISAPDLSICTP 97
G F + AWGS+ + G LL+ V++ +LN G + T + S D++ +P
Sbjct: 120 GDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASP 179
Query: 96 NLASIVSWNTLSSSYGSDHFPIVINFPIATSS 1
++ +W L S + SDH + F + +SS
Sbjct: 180 SIVRYNTWEVLKSYWYSDH--RYVRFSVDSSS 209
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 39.5 bits (88), Expect = 1e-04
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTGKATRRTQPHEEISAPDLSICTPN 94
G F WGS +N G+ +L+ + ++N G + + S DL+ C+P
Sbjct: 119 GDFNAWATEWGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVR-NSRTSIIDLTFCSPA 177
Query: 93 LASIVSWNTLSSSYGSDH 40
LAS ++W ++ SDH
Sbjct: 178 LASSMNWRVSNAYTLSDH 195
Score = 29.5 bits (63), Expect = 0.12
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = -3
Query: 485 SDGYGGVALLIKNNISFSQFTIPNHSSDFSIIAITINNICYVSLYIPHPTS-SVYNEIES 309
SD G A+ Q I H + +IA+ IN I + S Y P + E+
Sbjct: 47 SDSTGTAAIWASGRFPIQQI-ISRHGEGY-VIAV-INKITFCSCYAPPRWDLEKFEEMLK 103
Query: 308 IFS--IFP-NPILIMGDFNA 258
S ++ NPI+I GDFNA
Sbjct: 104 RISDEVYDVNPIIISGDFNA 123
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 38.7 bits (86), Expect = 2e-04
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTG-KATRRTQPHEEISAPDLSICTP 97
G F +V WGS ++ G LL + + +LN G +T S D++ TP
Sbjct: 123 GDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATP 182
Query: 96 NLASIVSWNTLSSSYGSDH 40
+A +WN SDH
Sbjct: 183 TIAQPGTWNVCGDYSYSDH 201
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 37.1 bits (82), Expect = 6e-04
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTGKA-TRRTQPHEEISAPDLSICTP 97
G F + WGS +N G LL MV+ ILN G A T + S D++ TP
Sbjct: 122 GDFNAWHTEWGSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATP 181
Query: 96 NLASIVSWNTLSSSYGSDH 40
+L +W L + SDH
Sbjct: 182 SLVLHDTWEVLDFA-RSDH 199
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 33.9 bits (74), Expect = 0.006
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTG-----KATRRTQPHE-EISAPDL 112
G F + AWGS + G LL +V+ +LN G + +P +++
Sbjct: 120 GDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCGSARPSRIDVAFASP 179
Query: 111 SICTPNLA--SIVSWNTLSSSYGSDH 40
SIC P+LA S W LS SDH
Sbjct: 180 SICRPDLAANSATCWRILSRYSYSDH 205
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 33.1 bits (72), Expect = 0.010
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTGKATRRTQPHEEISAPDLSICTPN 94
G F V WGS +N G +L+ + + N G T ++ S D++ C+
Sbjct: 117 GDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAG-TTPTFNRNKRTSIVDITFCSTT 175
Query: 93 LASIVSWNTLSSSYGSDH 40
L+ ++W + SDH
Sbjct: 176 LSERLNWRVSDALTLSDH 193
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.7 bits (66), Expect = 0.052
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTG-KATRRTQPHEEISAPDLSICTP 97
G F + WGS+ ++ G LL ++ + ++N+G + T + S D+ TP
Sbjct: 142 GDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCFATP 201
Query: 96 NLASIVSWNTLSSSYGSDH 40
++A +W + SDH
Sbjct: 202 SIARPETWE-VHEFARSDH 219
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 28.7 bits (61), Expect = 0.21
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTGKA 157
G + AWGS +N G ++ +VD +LNTG A
Sbjct: 120 GDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTA 158
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 28.3 bits (60), Expect = 0.28
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILNTG-KATRRTQPHEEISAPDLSICTP 97
G F + WGS + G LL V+ ILN G K T + S D+S +
Sbjct: 185 GDFNAWHEEWGSGRNGQRGIELLQTVETLGLSILNQGRKPTFIGRGFAASSVIDVSFASR 244
Query: 96 NLASIVSWNTLSSSYGSDH 40
+ +W+ + S SDH
Sbjct: 245 EIVRPDTWSVIPFS-RSDH 262
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 27.5 bits (58), Expect = 0.49
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3
Query: 437 FSQFTIPNHSSDFSIIAITINNICYVSLYIPHPTSS--VYNEIESIFSIFPNPIL 279
F++FT S+ +++ I +I VS+Y+ HP S VY I ++ + P P L
Sbjct: 558 FTRFTQEIFSALITLLFIFETSIKLVSVYVRHPLLSEYVYKNI-TVAPLVPTPCL 611
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 27.1 bits (57), Expect = 0.64
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -2
Query: 177 ILNTGKATRRTQPHEEISAPDLSICTPNLASIVSWNTLSSSYGSDHFPIVIN 22
+LN G P S DL+ + +A W LSS SDH I I+
Sbjct: 156 LLNDGSTPTYVGPGRT-SVVDLTFASRTVARSFKWEVLSSYMNSDHRAIRID 206
>Y17702-1|CAA76822.2| 260|Anopheles gambiae putative gVAG protein
precursor protein.
Length = 260
Score = 25.8 bits (54), Expect = 1.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 159 ATRRTQPHEE-ISAPDLSICTPNLASIVSWNTLSSSYGSDHFPIVINFPIA 10
A R +P+ + P L+ P LAS+ N S +YG D FP A
Sbjct: 81 ALGRIRPYPSAVKMPTLT-WDPELASLADANARSCNYGHDRCRATKKFPYA 130
>AF457548-1|AAL68778.1| 178|Anopheles gambiae antigen 5-related 1
protein protein.
Length = 178
Score = 25.8 bits (54), Expect = 1.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 159 ATRRTQPHEE-ISAPDLSICTPNLASIVSWNTLSSSYGSDHFPIVINFPIA 10
A R +P+ + P L+ P LAS+ N S +YG D FP A
Sbjct: 81 ALGRIRPYPSAVKMPTLT-WDPELASLADANARSCNYGHDRCRATKKFPYA 130
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 24.2 bits (50), Expect = 4.5
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 177 ILNTGKATRRTQPHEEISAPDLSICTPNLASIVSWNTLSSSYGSDH 40
+LN G + + S D+S C+P+L +W + SDH
Sbjct: 161 LLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDET-PSDH 205
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 23.8 bits (49), Expect = 6.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 273 GRFQCSNVAWGSSISNHYGSRLLDMVDKNKWCILN 169
G F ++ WGSS + G LL + D +LN
Sbjct: 121 GDFNAMHLDWGSSRTCPKGLELLQLADNLGLVLLN 155
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 682,161
Number of Sequences: 2352
Number of extensions: 12089
Number of successful extensions: 44
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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