Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00052
         (470 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     77   4e-16
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    26   0.58 
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   3.1  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   5.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   7.1  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   7.1  
DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted ...    22   9.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         22   9.4  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 76.6 bits (180), Expect = 4e-16
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +2

Query: 2   GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
           GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 35  GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70



 Score = 76.6 bits (180), Expect = 4e-16
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +2

Query: 2   GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
           GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 111 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146



 Score = 76.6 bits (180), Expect = 4e-16
 Identities = 35/36 (97%), Positives = 36/36 (100%)
 Frame = +2

Query: 2   GIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 109
           GIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 187 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -3

Query: 453 LSSDTVSRFYLKSIIHSSRERSYRLEGTYLFVVVFEDHRAVTLPAVVTVLHHR 295
           L S TV    +  +I  + E +  L GTY   ++F    +V L  VV   HHR
Sbjct: 270 LVSQTVFSLLVGHVITKTSE-AVPLLGTYFNCIMFMVASSVVLTVVVLNYHHR 321


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 381 LEGTYLFVVVFEDHRAVTLPAVVTVLHHR 295
           L GTY   ++F    +V L  VV   HHR
Sbjct: 293 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 321


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -3

Query: 462 FFFLSSDTVSRFYLKSIIHSSRERSYRLEGTYLFVVVFEDHRAVTL 325
           F +++S + SR   +  + SS E   R   T + V+ F DH+A+T+
Sbjct: 189 FSYITSGSGSRID-RCYVSSSLETQLRT--TDMHVLSFSDHKALTV 231


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -3

Query: 354 VFEDHRAVTLPAVVTVLHHRHE 289
           +F DHR    PA V  L   HE
Sbjct: 903 IFIDHRGHKAPAAVVGLQFLHE 924


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 64  PLGLQYPEGIHPPPGV 111
           P G+  P G H PPG+
Sbjct: 5   PPGVNRPPGSHRPPGL 20


>DQ370047-1|ABD18608.1|   89|Anopheles gambiae putative secreted
           peptide protein.
          Length = 89

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 299 TAMNTPAPHCSPVH 258
           T M T AP C P++
Sbjct: 19  TRMTTAAPQCDPIY 32


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 6/13 (46%), Positives = 7/13 (53%)
 Frame = -3

Query: 324 PAVVTVLHHRHEH 286
           PA    +HH H H
Sbjct: 150 PAAAAAMHHHHHH 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,163
Number of Sequences: 2352
Number of extensions: 8489
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)