Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00035
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    24   4.2  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.5  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    24   5.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.7  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   9.7  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2

Query: 362 WFPVLHHHCQD 394
           W+P + HHC D
Sbjct: 100 WYPEIKHHCPD 110


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 396  SWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 500
            SWL   HV    V E   +V+    +GS S +T+K
Sbjct: 3198 SWLLLAHVAPAAVREVKRIVQNFFGWGSSSSRTTK 3232


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 128 PRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEG 235
           P ++K S+P     K S T  P+S    P   C  G
Sbjct: 307 PIKLKLSLPYVEREKCSKTFRPWSFALGPGQMCAGG 342


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 82  HRQQ*RRRILVVETFCRY*QCKQFTK 5
           H QQ   +  ++  FCR  +CK+  K
Sbjct: 427 HHQQVHNQQRILYCFCRNVECKELEK 452


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 457 LTTSMPSTTFPKTTCLPSSQEVLTV 383
           L+ ++  T F +  CLP+S+E  TV
Sbjct: 226 LSETVEFTDFIRPICLPTSEESRTV 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 808,483
Number of Sequences: 2352
Number of extensions: 17635
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)