Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0218.Seq
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.2  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   3.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +1

Query: 559  DCNTQEPCYIRAPTTADTTRGAVGSFQP 642
            D N  E C+   PT      GA G  +P
Sbjct: 952  DANATENCFFIVPTVKQAVAGAAGKDEP 979


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +3

Query: 168 ELGIREPXQGXHHRXCSXQPDH*QESEHHEYCYKLWVGNG---QHIVRKYFPYNFRLIMA 338
           +LG+RE  +   H       +H  E+    Y  K+ +GN    +H  R+Y   N    ++
Sbjct: 397 KLGLRERPRLTKH----LNNEHVFEAFDRIYGNKINIGNTYAEEHYYRRYLTANLSSDLS 452

Query: 339 GNFVKLIYR 365
           G+FV   +R
Sbjct: 453 GDFVDAFFR 461


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
 Frame = +3

Query: 168 ELGIREPXQGXHHRXCSXQPDH*QESEHHEYCYKLWVGNG---QHIVRKYFPYNFRLIMA 338
           +LG+RE  +   H       +H  E+    Y  K+ +GN    +H  R+Y   N    ++
Sbjct: 397 KLGLRERPRLTKH----LNNEHVFEAFDRIYGNKINIGNTYAEEHYYRRYLTANLSSDLS 452

Query: 339 GNFVKLIYR 365
           G+FV   +R
Sbjct: 453 GDFVDAFFR 461


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 605  PTPPGEQLVPSSPRSTE 655
            P PP  + +P SPR+TE
Sbjct: 1108 PIPPRSRRLPPSPRTTE 1124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,509
Number of Sequences: 2352
Number of extensions: 13016
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)