Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30295.Seq
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    23   5.6  
DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domai...    23   7.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   7.4  

>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 119 DREKPKRSTKSNERRRSPREVLSFS 193
           +R  P+R +  N +RR P + + FS
Sbjct: 109 ERFDPERFSDGNTQRRGPYDYIPFS 133


>DQ370038-1|ABD18599.1|  122|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +3

Query: 102 KSLIALIGKSLKGALKVMSEDDPLEKC 182
           KS+ AL+  +L  A+ VM +DDP  KC
Sbjct: 2   KSVQALLLLTLL-AVAVMGDDDPDTKC 27


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 365 TXQHGVSLSRARDDVSPVAVGARV 294
           T   G SL    DD+  VAVG+R+
Sbjct: 632 TLYDGASLIGFADDIVLVAVGSRI 655


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,264
Number of Sequences: 2352
Number of extensions: 2601
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)