Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= psV30256.Seq
(603 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein. 29 0.15
AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical prote... 28 0.27
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 28 0.27
AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein. 27 0.35
AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein. 26 0.82
AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein. 26 0.82
AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein. 26 0.82
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 5.8
AJ278310-1|CAB93496.1| 219|Anopheles gambiae serine protease-li... 23 7.6
>AY341160-1|AAR13724.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 28.7 bits (61), Expect = 0.15
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -2
Query: 578 LAASETGGAPADLEKLVGDAVGSNPTLEASNNIE-REQVSVHSQVVSKNFLDLSDSLXFI 402
+A + TG P GD S+ L SN E R + V + +K D++ +
Sbjct: 87 IAKTGTGVTPTSSIASSGDDTNSSNNLTTSNGTEDRHECFVF--ISNKLASDIT-----L 139
Query: 401 TFGQSFDVCLRNYITE 354
T GQ+FD+ R Y+++
Sbjct: 140 TIGQAFDLAYRRYVSD 155
>AJ438610-6|CAD27478.1| 226|Anopheles gambiae hypothetical protein
protein.
Length = 226
Score = 27.9 bits (59), Expect = 0.27
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 261 KCIVFIRPTSENIALLSRELRDPKYGVYFIY 353
KC+ F RP S ALL+ E + Y + F +
Sbjct: 158 KCVPFCRPFSGQTALLTPESQSANYALTFAF 188
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 27.9 bits (59), Expect = 0.27
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 174 VQSIGNLTEGSLLIREDRQSC 236
++ +G T G ++IRED QSC
Sbjct: 849 MKDVGEKTTGPIVIREDNQSC 869
>AY341161-1|AAR13725.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 27.5 bits (58), Expect = 0.35
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 578 LAASETGGAPADLEKLVGDAVGSNPTLEASNNIE-REQVSVHSQVVSKNFLDLSDSLXFI 402
+A + TG P GD S+ SN E R + V + +K D++ +
Sbjct: 87 IAKTGTGATPTSSIASSGDDTNSSNNSTTSNGTEDRHECFVF--ISNKLASDIT-----L 139
Query: 401 TFGQSFDVCLRNYITE 354
T GQ+FD+ R Y+++
Sbjct: 140 TIGQAFDLAYRRYVSD 155
>AY341159-1|AAR13723.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.82
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 578 LAASETGGAPADLEKLVGDAVGSNPTLEASNNIE-REQVSVHSQVVSKNFLDLSDSLXFI 402
+A + TG P GD S+ SN E R + V + +K D++ +
Sbjct: 87 IAKTGTGVTPTSSIASSGDDTNSSNNSTTSNGTEDRHECFVF--ISNKLASDIT-----L 139
Query: 401 TFGQSFDVCLRNYITE 354
T GQ+FD+ R Y+++
Sbjct: 140 TIGQAFDLAYRRYVSD 155
>AY341158-1|AAR13722.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.82
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 578 LAASETGGAPADLEKLVGDAVGSNPTLEASNNIE-REQVSVHSQVVSKNFLDLSDSLXFI 402
+A + TG P GD S+ SN E R + V + +K D++ +
Sbjct: 87 IAKTGTGVTPTSSIASSGDDTNSSNNSTTSNGTEDRHECFVF--ISNKLASDIT-----L 139
Query: 401 TFGQSFDVCLRNYITE 354
T GQ+FD+ R Y+++
Sbjct: 140 TIGQAFDLAYRRYVSD 155
>AY341157-1|AAR13721.1| 159|Anopheles gambiae CED6 protein.
Length = 159
Score = 26.2 bits (55), Expect = 0.82
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 578 LAASETGGAPADLEKLVGDAVGSNPTLEASNNIE-REQVSVHSQVVSKNFLDLSDSLXFI 402
+A + TG P GD S+ SN E R + V + +K D++ +
Sbjct: 87 IAKTGTGVTPTSSIASSGDDTNSSNNSTTSNGTEDRHECFVF--ISNKLASDIT-----L 139
Query: 401 TFGQSFDVCLRNYITE 354
T GQ+FD+ R Y+++
Sbjct: 140 TIGQAFDLAYRRYVSD 155
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 5.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 370 ETTLLKYIK*TPYLGSLSSRDNRAMFSD 287
+TTL+ Y Y+GSL N + SD
Sbjct: 836 QTTLMSYSSNNDYIGSLVQVKNALVSSD 863
>AJ278310-1|CAB93496.1| 219|Anopheles gambiae serine protease-like
protein protein.
Length = 219
Score = 23.0 bits (47), Expect = 7.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 452 GCGQTPVLFQYCWMPPRSGWNQQHLQR 532
GCG+ + Y +P GW HL++
Sbjct: 182 GCGEDGIPGVYVNVPMFRGWIDDHLRQ 208
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,235
Number of Sequences: 2352
Number of extensions: 12190
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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