Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G12f
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.5  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   3.5  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   4.6  
DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domai...    23   8.1  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 273 ERCTPRHPPRAAEPVLCPSSISLPFSYAALELIPPGFSAP 392
           ER   R   R  E ++     SLP  + ++  +PPG SAP
Sbjct: 524 ERERERERERERERMMHMMPHSLPRPFFSIPGLPPGLSAP 563


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 125  NKKVYERLY*MSLQVSVSCTRPALCSG 45
            +KK+++ L   S  ++  CT P+LC G
Sbjct: 2323 SKKIWDALREKSF-LTTDCTNPSLCHG 2348


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = -3

Query: 502 IKTQVYWTTQEHRHRHIVEMFSIFKDFLSHV*SKTSHGAEKP 377
           +K  V W  QEH      E+ S+ + +   + +   H  E+P
Sbjct: 5   LKKYVLWFAQEHVDFRQAEIASLLRIWNIQMETPADHNPERP 46


>DQ370040-1|ABD18601.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -3

Query: 316 TGSAALGGCRGVQRSSRLLVCQCPITINNRVKRL 215
           T   A G  R   R + + VC C +TI   + RL
Sbjct: 19  TAIVAQGTGRKTVRKNAVFVCDCVVTIIVFLSRL 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 573,525
Number of Sequences: 2352
Number of extensions: 11467
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)