Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301G01f
         (468 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.11 
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   5.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   5.3  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   5.3  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 359 DDEILAEIKKCQTELTAVRKENCRNLKNLIGL 264
           +DE+  EIKK + E+T VR EN      + G+
Sbjct: 901 NDELKLEIKKKENEITKVRNENKDGYDRISGM 932


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -3

Query: 412 LNKEYLIQRIYHLSLIQLMMKY*QRLKNVKQN 317
           L ++YL+Q+ YHL   QL + + Q+L   +Q+
Sbjct: 27  LQRQYLLQQQYHLQ-AQLNLVHQQQLALEQQS 57


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 27/102 (26%), Positives = 41/102 (40%)
 Frame = -2

Query: 362 ADDEILAEIKKCQTELTAVRKENCRNLKNLIGLCKQEMIRLNLKKQLDQVDLECIDIYKK 183
           AD+   A+IKK   EL  V  +       + G  K+    ++L++ L Q      D  K+
Sbjct: 335 ADEAHQADIKKLVDELQEVEVKRAAFENEVAGESKKRGSNVHLERDLVQE----YDRLKQ 390

Query: 182 MVAAKQKKRPVTKKEKEDAWKAINEQIRLNKEINALPQTGPN 57
              A   K  +         K  ++Q RL+ EIN   Q   N
Sbjct: 391 KADATSSKYLIHLDSVNREQK--SDQDRLDSEINKKAQIEEN 430


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = -2

Query: 221 DQVDLECIDIYKKMVAAKQKKRPVTKK 141
           ++ +++ ++ +++M   KQK RP  KK
Sbjct: 182 ERENIKSLERFRRMELEKQKIRPTNKK 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,005
Number of Sequences: 2352
Number of extensions: 6968
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)