Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D12f
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   2.6  
U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    23   4.6  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   6.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.1  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 359  GDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLM 469
            G+ + +TI A+   DN  F+     Q K +DY + ++
Sbjct: 1717 GEDEQITILARHGEDNQLFLKAILGQYKQNDYNIDII 1753


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = +2

Query: 248 SLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNA 400
           ++ S  L  + F  YRCDR++S   + G    +L  +   +++ + ++D +
Sbjct: 119 NIPSALLFNNNFSVYRCDRSLSGSSSRGG-GVLLAVSNAYESIELPSRDRS 168


>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +2

Query: 269 RADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVS 448
           +++GFD Y     +++G+ +     +L+  G+  + T++   N D  TF   SP++ + S
Sbjct: 42  KSEGFDDYM----LALGVGM-----VLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRS 92


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 11/53 (20%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = +2

Query: 158 LEAIKDLLTQATFDCDDNGIQLQAMDNSHV--SLVS-LTLRADGFDKYRCDRN 307
           +  ++    +     +++G ++ A+  + +  S+ S + L +D ++ YRCDR+
Sbjct: 14  VRGLRTKYNELRLSANESGFEMLALTETWLNESIPSNMVLDSDSYNIYRCDRS 66


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 212 GIQLQAMDNSHVSLVSLTLRADGFDKY 292
           G+Q+ A+   H  +V  +L  DGF  Y
Sbjct: 913 GVQMDALQMFHNIIVFRSLFLDGFKMY 939


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 6.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 212 GIQLQAMDNSHVSLVSLTLRADGFDKY 292
           G+Q+ A+   H  +V  +L  DGF  Y
Sbjct: 914 GVQMDALQMFHNIIVFRSLFLDGFKMY 940


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,284
Number of Sequences: 2352
Number of extensions: 9896
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)