Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D01f
         (354 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        26   0.36 
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         23   3.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   4.4  

>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 26.2 bits (55), Expect = 0.36
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 41  MKSISIVPGTHTPRNDLLVSSLYS 112
           MK I I  G H PR+ L+V S++S
Sbjct: 145 MKDIEIA-GVHIPRDSLIVMSIFS 167


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -2

Query: 113 WNKDWKPGDHSWAYVYQEQ 57
           WN  W      W Y+  EQ
Sbjct: 18  WNGPWSDKSPEWRYIPDEQ 36


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 216 PLQLPIXTIHDASQH 172
           P+QLP+ TI D + H
Sbjct: 7   PVQLPVQTITDTNVH 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 408,628
Number of Sequences: 2352
Number of extensions: 8513
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)