Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301B11f
         (426 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    25   0.85 
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    23   6.0  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    22   7.9  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    22   7.9  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 0.85
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 406 DVHIIQKLCQRQCVN*LFCR 347
           D++ +QK C +QC+   FC+
Sbjct: 54  DLNELQKPCTKQCIQGCFCK 73


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 267 RFCWWLKFW 241
           R CWW ++W
Sbjct: 5   RSCWWWRWW 13


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 124 RGYGFVEYTRPDDAVKARKAFNGLLMQNKTLK 219
           +GYG +   + +D  K R   N ++MQ K ++
Sbjct: 137 KGYGGLLAEQGEDWHKMRTIVNPIMMQPKVIR 168


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 250 KPPTKPEADWNLYICNLPNELTLQDLH 330
           K P KP+  +      LP+ + L D H
Sbjct: 792 KTPDKPDFPYRKEFTELPDTIELVDAH 818


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,604
Number of Sequences: 2352
Number of extensions: 7512
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)