Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30058
         (519 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   1.5  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    25   1.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.0  
AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione S-tran...    23   4.7  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   6.2  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +2

Query: 140 QKQKYLPRMATGELIGCFGLTEPNFGSDAGGLVTRAKHDAK 262
           QK   LP+    + +      EP  GSD GG  T +  D K
Sbjct: 572 QKALVLPKRNAPKALEALVKDEPKEGSDKGGASTPSGDDPK 612


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 451 GCRCPQRKFPIDFGRI*TFLY 389
           G R PQ K PI+ GRI + L+
Sbjct: 383 GSRVPQEKDPIELGRIVSDLF 403


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 92   QSSLAMGSIYMYGTEDQKQKY 154
            Q   A GS+ M+ TEDQK+ Y
Sbjct: 1570 QKKKAGGSLEMFMTEDQKKYY 1590


>AY070256-1|AAL59655.1|  227|Anopheles gambiae glutathione
           S-transferase E6 protein.
          Length = 227

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 434 LRASTTGMILLDEVVIPEENLLPNVVGL 517
           LR  T  + +L +  IPEENL   + GL
Sbjct: 112 LRFCTDNLTVLGKSAIPEENLQRALEGL 139


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
 Frame = -1

Query: 258 ASCFAL-VTNPPASLPKLGSVNPKQPINSPVA 166
           A C  L    P  +LPKL +    +PI  P A
Sbjct: 77  APCSKLFAAEPRVALPKLSATGASKPIAEPKA 108


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,502
Number of Sequences: 2352
Number of extensions: 11098
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)