Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_E13
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.0  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.1  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       23   5.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   5.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.5  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    23   9.5  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 489 QHYPNKGQNICYDHKNGTRYSPTDPSSPR 403
           Q + ++GQ+    H NGT + P+  SS R
Sbjct: 651 QAHQHQGQHHAQHHSNGTHHGPSLMSSAR 679


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 230  PRYMVPQNTPTPRQHIIVAIRVAC 159
            P YM  +  P  R H+   I++AC
Sbjct: 970  PDYMFLRQVPIRRVHLFTMIQLAC 993


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 232 SALSILMFDEVFHFRLIWIEALQ 300
           SA +ILM     +FR +W EA Q
Sbjct: 107 SADTILMIVNTLYFRGLWEEAFQ 129


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 105 KN*QNNGGRVSSLSNTGATCNPYRYNNVLS 194
           K   NN    ++ SNTGAT N    N  LS
Sbjct: 96  KTNNNNNNNNNNGSNTGATVNSGSSNAALS 125


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 330 HACTSHNEYHLQGFNPNQSKVEYFVE 253
           HAC S+   +  GF P +S     VE
Sbjct: 640 HACRSYLSPYQHGFVPKKSTTTNLVE 665


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -1

Query: 189 THYCSDKGCMWHPC*TSLTRVPHYFVNSYSLL 94
           THYC   GC   P    L    H+F     +L
Sbjct: 439 THYCGGAGCETRP--GRLRGFRHFFAKVIRML 468


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,718
Number of Sequences: 2352
Number of extensions: 14245
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)