Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20092
         (738 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          25   1.8  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.3  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.6  
AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18...    23   7.4  
AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.     23   9.8  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 17/69 (24%), Positives = 24/69 (34%)
 Frame = +2

Query: 137 LRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSSDQRGVDAGVKLKVVGRAGAGVDNIDV 316
           + +RHHH    L                A         V+    +   G AG G D  + 
Sbjct: 488 MASRHHHHRAGLHHHDLASGVVVNAVLAAGGGGGGSGCVNGSRTVGAGGMAGGGSDGPEY 547

Query: 317 DSAGKKGVG 343
           + AG+ GVG
Sbjct: 548 EGAGRGGVG 556


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 570 VHAEGVHPSGHLAADPAKAKEARVLP 493
           +HA   HP  H AA+P      ++LP
Sbjct: 223 LHAPPSHPGAHRAAEPRLDWRIKILP 248


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 470 EPGPTCQPSAHWKLGPRGEP 411
           EPGP  +P      GP GEP
Sbjct: 629 EPGPKGEPGLLGPPGPSGEP 648


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = -1

Query: 330 LPAESTSMLSTPAPAR 283
           LPA+++S L++P PAR
Sbjct: 364 LPADNSSALNSPNPAR 379


>AF117750-1|AAD38336.1|  380|Anopheles gambiae serine protease 18D
           protein.
          Length = 380

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 308 CCPHQLQHDRPPS 270
           CCP   Q D PPS
Sbjct: 60  CCPQSQQLDSPPS 72


>AJ297933-1|CAC35453.2|  392|Anopheles gambiae Ag9 protein protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 179 RTSYGDTQPRRSGCAFSNSSDQ 244
           R  Y +T+    GC F  SSD+
Sbjct: 329 RARYNETRDEHMGCNFLISSDE 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 717,899
Number of Sequences: 2352
Number of extensions: 13954
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)