Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30038X
         (431 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   0.87 
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   3.5  
AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease pr...    23   3.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   4.6  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 25.4 bits (53), Expect = 0.87
 Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
 Frame = +1

Query: 193  RRSRVREIQNSSS-VKTRSG-------RTWMNS*RNTSTNGANSGPRRRMSSNALKRSRP 348
            RRSR R    S S  ++RSG       R    S R+ S + + S  R   +  +  RSR 
Sbjct: 1063 RRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGS-RSRSRSRSRSRSRSGSAKGSRSRSRS 1121

Query: 349  SARFSRAEEEKRLAQKKKGRRRKG 420
             +  SR+    R   +  G R+ G
Sbjct: 1122 GSGGSRSRSRSRSRSQSAGSRKSG 1145



 Score = 24.2 bits (50), Expect = 2.0
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = +1

Query: 217  QNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQK 396
            Q  S  ++RSG    +  R+ S +G+ +G R    S +  RSR     SR+      A+ 
Sbjct: 1062 QRRSRSRSRSGSGSRS--RSRSGSGSRAGSRAGSGSRSRSRSR-----SRSRSRSGSAKG 1114

Query: 397  KKGRRRKG 420
             + R R G
Sbjct: 1115 SRSRSRSG 1122


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 302 PLFAPFVDVFLQLFIQVRPLLVLTLDEFWI 213
           PL  P  DVFL  F  V P     + E W+
Sbjct: 12  PLSYPQTDVFLVCFSVVSPSSFENVKEKWV 41


>AJ271117-1|CAB88872.1|  355|Anopheles gambiae serine protease
           protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 13  TSLCCRSKNQCRVTE*PTS 69
           T +CC S+ Q R +  PTS
Sbjct: 74  TLVCCASEQQTRTSSFPTS 92


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 19/74 (25%), Positives = 29/74 (39%)
 Frame = +1

Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
           RS  R +  S S  +RS      S   + T  + S  R  + +    R+R + R      
Sbjct: 422 RSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPARGHVRARLTRRTIPPTR 481

Query: 376 EKRLAQKKKGRRRK 417
               A   +GRRR+
Sbjct: 482 VAAAAAAPEGRRRR 495


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,021
Number of Sequences: 2352
Number of extensions: 5132
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)