Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0115
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    26   1.2  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.7  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   4.7  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   6.3  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   6.3  
AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450 pr...    23   8.3  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 477 VIMQIITLVLNYNYFPLLVI 536
           V+M++I   LN+ Y PLLV+
Sbjct: 32  VVMELIGNFLNFYYMPLLVV 51


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 349 TYISR*VAYLRGRGLWTPVTLNLVSCEL 266
           T +++ + +  G+ +WTP  +   SCE+
Sbjct: 135 TTLTKAILHYTGKVIWTPPAIFKSSCEI 162


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +1

Query: 358 LSIVTTAAPPFRPKRITASRQKQAGWWYLPTRTHKRSC 471
           + I+ TA      KR   +  K A WW L     ++ C
Sbjct: 251 MRILVTACNATMTKRKRYTPNKSAFWWTLEIEALRKEC 288


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 416 GRNRQGGGTYPRGLTRGPATSNY 484
           G+  Q GG YPRG  R    + Y
Sbjct: 253 GQYDQRGGNYPRGTERNRNGNGY 275


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 441 VPPPCLFLP*SSNAFRSEG 385
           +PP C+  P  SNA  S G
Sbjct: 468 LPPRCVLCPDGSNAHHSSG 486


>AY748845-1|AAV28191.1|  102|Anopheles gambiae cytochrome P450
           protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 388 FRPKRITASRQKQAGWWYLPTRTHKRSC 471
           FRP+R      K+  + Y+P     R+C
Sbjct: 29  FRPERFADGETKRNPFAYIPFSAGSRNC 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,220
Number of Sequences: 2352
Number of extensions: 12940
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)