Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0112
         (407 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.4  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   4.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   4.3  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   4.3  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   4.3  
AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical prote...    23   4.3  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -2

Query: 286  HGLNLREFASPSKTSVSQNLPPDRNLDSLRRSGEKI 179
            HG N R  ++PS+    +     R ++ LRR+  ++
Sbjct: 1161 HGRNRRSRSAPSEADTIRRRMRRREMERLRRTARRV 1196


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 407 TTHYRANWVPGXXXXXXXXXPNYSLLA*EPFQLRPDG*VNSRAQ 276
           T H R+  VP            +S ++ EP  L PD  +  RAQ
Sbjct: 156 TIHRRSPGVPHHVAEPQHLGATHSCVSPEPVNLLPDDELVKRAQ 199


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 407 TTHYRANWVPGXXXXXXXXXPNYSLLA*EPFQLRPDG*VNSRAQ 276
           T H R+  VP            +S ++ EP  L PD  +  RAQ
Sbjct: 156 TIHRRSPGVPHHVAEPQHLGATHSCVSPEPVNLLPDDELVKRAQ 199


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 407 TTHYRANWVPGXXXXXXXXXPNYSLLA*EPFQLRPDG*VNSRAQ 276
           T H R+  VP            +S ++ EP  L PD  +  RAQ
Sbjct: 132 TIHRRSPGVPHHVPEPQHMGATHSCVSPEPVNLLPDDELVKRAQ 175


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = -1

Query: 407 TTHYRANWVPGXXXXXXXXXPNYSLLA*EPFQLRPDG*VNSRAQ 276
           T H R+  VP            +S ++ EP  L PD  +  RAQ
Sbjct: 132 TIHRRSPGVPHHVPEPQHMGATHSCVSPEPVNLLPDDELVKRAQ 175


>AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical protein
           11 protein.
          Length = 56

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -1

Query: 170 LIVMNLIFFFLEHCFAFYIFLIL 102
           L+++  +FF+  HC   Y++L +
Sbjct: 12  LVLLICLFFYHTHCTTAYLWLAM 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 363,857
Number of Sequences: 2352
Number of extensions: 5869
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)