Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0055
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.7  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    23   7.0  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   9.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +2

Query: 413  DSXHGLSAGPVAYSTPSFAGFPGGHTAFTFXPAAN 517
            D+   L  G VA   PS  G+P  HT +   P  N
Sbjct: 1754 DNATQLLTGKVAELNPSCEGYPYTHTIYGNDPTEN 1788


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +2

Query: 53  YGKLQQYNLVGSLGGSPXHYASGVKGLSSYGSTGPVL 163
           +G L+   +V   G  P H   G    +S    GP L
Sbjct: 183 HGFLKNLGVVDIAGSGPVHLIGGASAFASAAILGPRL 219


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 431  SAGPVAYSTPSFAGFPG 481
            S GP  Y  P FA  PG
Sbjct: 1212 SRGPGMYKLPGFADIPG 1228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,902
Number of Sequences: 2352
Number of extensions: 8709
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)