Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0060
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    24   4.2  
EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.            23   9.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.7  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 239 ICLIYSFVQFVFYHYYRATPTI 174
           +C IY    +++Y++Y+  P I
Sbjct: 141 LCAIYPHTGYLYYYHYQIFPKI 162


>EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -3

Query: 278 VSNYLESQSGNTFICLIYSFVQFVFYHYYRAT 183
           +SN   S  G T +CLI S       H YRAT
Sbjct: 3   ISNIFVSSIGITLVCLIVS------THEYRAT 28


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = -1

Query: 724 RESSFPESNRYYAEIKINSS 665
           R S FPE +RYY  IK  SS
Sbjct: 478 RNSIFPEEHRYYL-IKDGSS 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,323
Number of Sequences: 2352
Number of extensions: 12055
Number of successful extensions: 49
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)