Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= P5PG0084
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   2.5  
AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    23   7.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.6  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 519 HYVR**NKSRSVSQGICQKY 460
           H+VR   K+R V+QG CQK+
Sbjct: 763 HFVR--YKARLVAQGFCQKF 780


>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 625 PRTLYLNNYAAIKTKHIHRSLYT 557
           PR  +LN  + IK K  HR+++T
Sbjct: 173 PRYPFLNADSHIKRKRRHRTIFT 195


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 50  NRQIYLLVERFLVTIRRSTIVERSCIRARELHLHCIKRYPNTA 178
           N  +  ++ + L+T R  T  E+ C+R    H+ C    PN A
Sbjct: 848 NLHLPAIMAKALLTNRYVT--EQDCLRVGGQHISCAGNPPNIA 888


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,137
Number of Sequences: 2352
Number of extensions: 12470
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)