Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0198
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.8  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.4  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   9.8  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 174  KVKTNGHQINVNNTFVKFYKQKIVSAQQKTFFH 272
            +VK + HQ+ + N FVK+   K++  Q+    +
Sbjct: 919  RVKLSAHQLEMVNCFVKYTFTKVLRLQKSLMLY 951


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 355 VSHRTEPGHRVTGESKYIRRTGAKLRSSRE 444
           ++ RT  G   TGE++  R  G +LRSS +
Sbjct: 856 LAERTNDGDGNTGEAQQYRSGGIELRSSNK 885


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = +1

Query: 598 HHH*RTRTPPGSERG--QQPHFTSH 666
           HHH   + PPGS  G   QP  + H
Sbjct: 823 HHHAAQQPPPGSHPGAQTQPQLSQH 847


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = +3

Query: 318 CKG*PN--DYEK*ASIPPHRARAQSHRGVQIYSKNRSKASQQQRMTTR 455
           C+G  N   +++   +  HR R  SH+ V    + R+  +Q++R   R
Sbjct: 336 CEGQQNIASFKQAIHVNKHRLRDNSHQLVDALERQRAALAQEERNQAR 383


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 465 GRSIWLSFSAAAKLCSGSSNIFGLPGDSVPWL 370
           G S+ LSF+   +      N + +P    PW+
Sbjct: 859 GHSMDLSFAVLERSMFHIQNAYRIPSSGCPWM 890


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,273
Number of Sequences: 2352
Number of extensions: 16499
Number of successful extensions: 52
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)