Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV120112.Seq
         (843 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    27   0.54 
AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14...    24   6.7  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   8.8  

>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 27.5 bits (58), Expect = 0.54
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
 Frame = +2

Query: 197 RLHDWTKTGSSLQSSRGWNIVALLIPSIL-KLFRHIIEKGEASLEERLHLRETSRKEFVK 373
           RL  + K   S      + + A ++ +   + F  + E      E RL LRE  RKE  K
Sbjct: 380 RLLTYEKVSDSEADLGAFEMPATVVENFRERYFTQLAEDNGTRKERRLELREVGRKE-AK 438

Query: 374 VRGK 385
            RGK
Sbjct: 439 KRGK 442


>AF007166-1|AAB62929.1|  360|Anopheles gambiae serine protease 14D
           protein.
          Length = 360

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = -3

Query: 715 RDCIDPLSESNKCL 674
           +DC++P+ E+ KC+
Sbjct: 29  QDCVNPVGEAGKCV 42


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 230 GWNRSLSSHVIANPSQNLPCQSN 162
           GW + + SH    PSQ  P Q N
Sbjct: 522 GWVQPVPSHTQNGPSQPQPQQQN 544


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 904,459
Number of Sequences: 2352
Number of extensions: 19226
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)