Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV120110.Seq
(826 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 167 4e-43
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 27 0.53
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 27 0.93
DQ212042-1|ABB00987.1| 102|Anopheles gambiae defensin protein. 25 2.8
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 3.7
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 3.7
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 3.7
AY745224-1|AAU93491.1| 103|Anopheles gambiae cytochrome P450 pr... 24 4.9
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 24 6.5
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 167 bits (406), Expect = 4e-43
Identities = 76/87 (87%), Positives = 80/87 (91%)
Frame = +3
Query: 501 GYHVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIV 680
G VCNLEEK GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIV
Sbjct: 110 GTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIV 169
Query: 681 AGGGRIDKPILKAGRAYHKYKVKRNCW 761
AGGGRIDKPILKAGRAYHKYKVKRNCW
Sbjct: 170 AGGGRIDKPILKAGRAYHKYKVKRNCW 196
Score = 97.1 bits (231), Expect = 6e-22
Identities = 43/54 (79%), Positives = 48/54 (88%)
Frame = +2
Query: 257 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 418
KLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDPY+F+ K+LFIA EG
Sbjct: 28 KLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEG 81
Score = 60.5 bits (140), Expect = 6e-11
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +1
Query: 418 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTMCAILKRK 531
+YTGQFVYCG++A L++GNV+P+G MPEGT+ L+ K
Sbjct: 82 MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEK 119
Score = 51.6 bits (118), Expect = 3e-08
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 767 VRGVAMNPVEHPHGGGNHQH 826
VRGVAMNPVEHPHGGGNHQH
Sbjct: 199 VRGVAMNPVEHPHGGGNHQH 218
Score = 50.4 bits (115), Expect = 7e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +3
Query: 177 MGRVIRAQRKGAGSVFVSHTKKRKG 251
MGRVIRAQRKGAGSVF +HTKKRKG
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKG 25
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 27.5 bits (58), Expect = 0.53
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 651 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 737
S+ + +G V GG D IL GRAYH+
Sbjct: 81 SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 26.6 bits (56), Expect = 0.93
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 349 GCCTLPRSIQVQDKEGALHCSRRLYTGQFVYCGKKATLE 465
GCC LP + Q K+ + + + R T F Y +++ +E
Sbjct: 16 GCCALPANTNAQTKQDSSNNNNRT-TELFAYPAEQSAIE 53
>DQ212042-1|ABB00987.1| 102|Anopheles gambiae defensin protein.
Length = 102
Score = 25.0 bits (52), Expect = 2.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 355 CTLPRSIQVQDKEGALHCSRRLYTGQFVYCGKKA 456
C L R V A HC R Y G YC KA
Sbjct: 65 CDLARGFGVGSSLCAAHCIARRYRGG--YCNSKA 96
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 3.7
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +2
Query: 653 KQQRHGRYCCWRWTY 697
+QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 284 RHGYIKGVVKDIIHDP 331
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 284 RHGYIKGVVKDIIHDP 331
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AY745224-1|AAU93491.1| 103|Anopheles gambiae cytochrome P450
protein.
Length = 103
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 359 HFRDPYKFKTRKELFIAPEGSTQA 430
HF DPYK+ ++ F A G ++A
Sbjct: 28 HFADPYKYDPKR--FAAENGGSKA 49
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.8 bits (49), Expect = 6.5
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = -2
Query: 501 LRHSSNRHHISNFKSCFLSTINKLACVEPSGAMKSSFLVLNLYGSRKCTTAKGAPLPGSW 322
+RH +++ SCFL +N + +G S L+L S A + P S
Sbjct: 177 MRHYVPHISLNSSSSCFLDVLNLHELYQLNGVHNHSNHYLDLVLSNSAAAACSSVYPASS 236
Query: 321 II 316
++
Sbjct: 237 LL 238
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 919,683
Number of Sequences: 2352
Number of extensions: 20325
Number of successful extensions: 34
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -