Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021133
(652 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 25 2.7
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 3.6
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 24 3.6
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 24 3.6
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 24 3.6
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 24 3.6
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 24 3.6
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 4.8
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 24.6 bits (51), Expect = 2.7
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 605 HGLHCLCNPENNVRKIS*HNEILFLCR 525
H HC ++ R++ +N++L+LC+
Sbjct: 60 HHTHCTGLSRDSTRELGRNNQLLWLCK 86
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 24.2 bits (50), Expect = 3.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 161 LGNVSFDSTAWSMKLTKTV 217
+GN +D T WSM +TV
Sbjct: 16 IGNPCWDCTVWSMASNRTV 34
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 24.2 bits (50), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 91 TTK*RKMTNMIPTMWPITLTEPNLGKRQLRLNSMVNEAYENGISFA 228
TT K T P P TLT N G+ + + +E G SFA
Sbjct: 130 TTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSFA 175
Score = 23.0 bits (47), Expect = 8.4
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 342 LYVSRALKSKWLLDPAHEAIMTPQWLEDKLFPTMFTTAV 458
+YV A + WL D H T + K T TT V
Sbjct: 96 VYVQFANEGYWLTDKKHTITRTKATVAPKSTTTTTTTTV 134
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 24.2 bits (50), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 91 TTK*RKMTNMIPTMWPITLTEPNLGKRQLRLNSMVNEAYENGISFA 228
TT K T P P TLT N G+ + + +E G SFA
Sbjct: 130 TTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSFA 175
Score = 23.4 bits (48), Expect = 6.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 342 LYVSRALKSKWLLDPAHEAIMTPQWLEDKLFPTMFTTAV 458
+YV A + WL D H T + K T TT V
Sbjct: 96 VYVQFANEGYWLTDKKHTVTRTKATVAPKSTTTTTTTTV 134
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 24.2 bits (50), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 91 TTK*RKMTNMIPTMWPITLTEPNLGKRQLRLNSMVNEAYENGISFA 228
TT K T P P TLT N G+ + + +E G SFA
Sbjct: 130 TTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSFA 175
Score = 23.4 bits (48), Expect = 6.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 342 LYVSRALKSKWLLDPAHEAIMTPQWLEDKLFPTMFTTAV 458
+YV A + WL D H T + K T TT V
Sbjct: 96 VYVQFANEGYWLTDKKHTVTRTKATVAPKSTTTTTTTTV 134
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 24.2 bits (50), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 91 TTK*RKMTNMIPTMWPITLTEPNLGKRQLRLNSMVNEAYENGISFA 228
TT K T P P TLT N G+ + + +E G SFA
Sbjct: 128 TTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSFA 173
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 24.2 bits (50), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 91 TTK*RKMTNMIPTMWPITLTEPNLGKRQLRLNSMVNEAYENGISFA 228
TT K T P P TLT N G+ + + +E G SFA
Sbjct: 130 TTTTVKPTTTTPPPCPPTLTTFNGGQPTCAGKLLFEDTFEQGSSFA 175
Score = 23.4 bits (48), Expect = 6.3
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +3
Query: 342 LYVSRALKSKWLLDPAHEAIMTPQWLEDKLFPTMFTTAV 458
+YV A + WL D H T + K T TT V
Sbjct: 96 VYVQFANEGYWLTDKKHTVTRTKATVAPKSTTTTTTTTV 134
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.8 bits (49), Expect = 4.8
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +3
Query: 456 VSKMKNWLYLNLKDELR-CKNSISS 527
+S+ NW+ +NL + L+ KN ++S
Sbjct: 1057 ISRFSNWIKMNLANALKFVKNKLTS 1081
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,671
Number of Sequences: 2352
Number of extensions: 13910
Number of successful extensions: 42
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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