Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021055
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    24   5.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.0  
AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450 pr...    23   8.8  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.8  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 327 GFRYAAIQSLLSFGHQ 280
           G R+AAI+ LL + HQ
Sbjct: 301 GHRFAAIEQLLKWAHQ 316


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -2

Query: 560 FNCTSTIATIAKPESRAVFCWKPSVSPY*AATSSTRGTPAYEAR 429
           F C S + T+  PE     C   S+SP    + S    P+   R
Sbjct: 327 FLCVSILGTLITPELWMKNCKSCSISPVSDRSESVSPVPSLPVR 370


>AY745209-1|AAU93476.1|  167|Anopheles gambiae cytochrome P450
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
 Frame = -1

Query: 513 GSVLLEAFSFALLSCNFL-----HERYAGV*SPSPDCIGVSPDITHLCFYKR 373
           G  L+  FSF +++ N L     H     +    P C+ V PD   L F +R
Sbjct: 114 GQNLVRGFSFIIIA-NILQKYDVHSNDLSLIKMYPACVAVPPDTYPLAFTQR 164


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +3

Query: 483 RN*RLPAKHCPTFRFRYGGYGRSTIKSSPTAVPKE 587
           R  RLPA+  PT +       +   +S+ +AVP E
Sbjct: 203 RQQRLPAQQWPTVQQSVRAQRQGVTESASSAVPDE 237


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,921
Number of Sequences: 2352
Number of extensions: 15161
Number of successful extensions: 30
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)