Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0045
(643 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 42 2e-05
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 40 9e-05
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 36 8e-04
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 36 0.001
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 33 0.008
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.67
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 26 1.2
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.5
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 2.7
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 2.7
AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal ... 23 6.2
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 6.2
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 8.2
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 23 8.2
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 41.9 bits (94), Expect = 2e-05
Identities = 31/177 (17%), Positives = 81/177 (45%)
Frame = +2
Query: 80 KMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQ 259
+++ + KK++ ++ A + C + KD L+A+ A+ + + ++++++ E +L +
Sbjct: 742 EIEELNKKIETLQKTIVEARETQTQCSAKVKD--LQAKIADGKGHR-ERELKSAEEDLKR 798
Query: 260 TQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQA 439
+++ + ++ E+ + + E+ L + I A +L E S
Sbjct: 799 SKKKSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGT 858
Query: 440 ADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADL 610
DE A L+ + +E+M++ +LK ++ K+ DE+ ++ E ++
Sbjct: 859 TDEMTAAVTALKQQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEI 915
Score = 25.4 bits (53), Expect = 1.5
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +2
Query: 98 KKMQAMKLEKDNALDRAAMC-----EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT 262
KK+Q K + +++ AM E+Q K+ R + E++ +KKIQ I +LD+
Sbjct: 968 KKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDD----KKKIQAIITDLDEE 1023
Query: 263 QESLMQV 283
++ ++V
Sbjct: 1024 KKKKLKV 1030
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 39.5 bits (88), Expect = 9e-05
Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 4/144 (2%)
Frame = +2
Query: 98 KKMQAMKLEKDNALDRAA--MCEQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQ 265
KK+Q L + L + A + E + ++ LR E +LQK I+ + +LDQ +
Sbjct: 754 KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813
Query: 266 ESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAAD 445
++ Q + K+ A+ E+E+A + I L ++++ +
Sbjct: 814 RTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQQARHDLQTNHKVKQQALKRSTESME 873
Query: 446 ESERARKVLENRSLADEERMDALE 517
E +R R L + ++ R +A E
Sbjct: 874 ERKRTRVALS--AALEQARQEASE 895
Score = 29.1 bits (62), Expect = 0.13
Identities = 21/102 (20%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Frame = +2
Query: 65 KNKTTKMDAIKKKMQAMKLEKD-NALDRAAMCEQQAKDANLRAEKAEEEAR--QLQKKIQ 235
+N + ++ I+K A ++E+D +R + + + + + EKA+ + R +L I
Sbjct: 406 RNASERVTRIQK--DARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIA 463
Query: 236 TIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQ 361
+ + E+D ++ V EEK +SE + ++++
Sbjct: 464 SAQREVDLMYNTMAHVKDAREEKHHERCAKQSETTRIEKQLE 505
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 36.3 bits (80), Expect = 8e-04
Identities = 36/170 (21%), Positives = 68/170 (40%)
Frame = +2
Query: 95 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESL 274
+++ Q + E D ++ E K+ R + E+ R LQ+++ ++ QT+ +
Sbjct: 618 RQEHQRLVRECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQL----SKYQQTKMKV 673
Query: 275 MQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESE 454
+ K +E L N + E R + A + + AS+ D E
Sbjct: 674 KRQEQKCKELTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLE 733
Query: 455 RARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 604
+ ++ E R+ E LE+ + A+ K V +KLA V+A
Sbjct: 734 QRIRLFEERNNDREANFRLLEDAYQSAK-------KTLANVEKKLAEVKA 776
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 35.5 bits (78), Expect = 0.001
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Frame = +2
Query: 86 DAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQ 265
D +++ +A+ NA D A Q A+D AE+A + A ++K+ +N
Sbjct: 1417 DLLQRAEEALYAASRNAED-ARKNAQTAQDKY--AEEASKLAENIKKRANATKNTARDLH 1473
Query: 266 ESLMQVNGKLEEKEKALQNAESEVA----ALNRRIQXXXXXXXXXXXXXATATAKLSEAS 433
Q+NG+L + + L+ E+++ N + + + E S
Sbjct: 1474 HEADQLNGRLAKTDNRLEEREAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREVS 1533
Query: 434 QAADESERARKVLENRSLAD-EERMDALENQLKEAR 538
E R++ N SL D E R+ A E +L++A+
Sbjct: 1534 LIMSELANLREIDVN-SLDDLERRLSAAEKELEDAQ 1568
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 33.1 bits (72), Expect = 0.008
Identities = 29/159 (18%), Positives = 59/159 (37%), Gaps = 7/159 (4%)
Frame = +2
Query: 77 TKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELD 256
TK++ + K++ + E+ + + + E+E Q I+ +E
Sbjct: 900 TKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERT 959
Query: 257 QTQESLMQVNGKLEEKEKALQNA-------ESEVAALNRRIQXXXXXXXXXXXXXATATA 415
Q +E ++ +LEE + A++ A + E+ AL +R T
Sbjct: 960 QLEEEANKLREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIET 1019
Query: 416 KLSEASQAADESERARKVLENRSLADEERMDALENQLKE 532
KL E + K L+ + +E + L+ +E
Sbjct: 1020 KLQETKDTLPHWQLQLKPLKLHEIPEEPPQEPLKEYTEE 1058
Score = 29.9 bits (64), Expect = 0.072
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 206 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 349
E ++K+Q NE + ++L V GKL+E A+Q+ S+ L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 24.2 bits (50), Expect = 3.6
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 419 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 598
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 599 EADL 610
E+ L
Sbjct: 375 ESTL 378
Score = 24.2 bits (50), Expect = 3.6
Identities = 20/101 (19%), Positives = 39/101 (38%)
Frame = +2
Query: 242 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKL 421
E+EL Q + KLE + + E ++ R+Q TA KL
Sbjct: 491 ESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550
Query: 422 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFL 544
E + E + + ++ + +E M A+++ + + L
Sbjct: 551 QENANEERELTQTLRAVQGKL---QESMAAMQSTRSQGKVL 588
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.67
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +2
Query: 446 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 577
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 25.8 bits (54), Expect = 1.2
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 146 AAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 316
AA E+Q A ++ +E + LQK++ + + + L+ N + E ++AL
Sbjct: 116 AATLEEQLHAAQQETQQEQEMKKALQKQLDALTDSRNALYIDLLLANIAIGETKQAL 172
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 1.5
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +1
Query: 199 RRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSAER*VRSGCPEPTYPTAGGGP 378
R+R + EED D +R S +G R R G GS R+G AG G
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS-----RAG------SRAGSGS 1095
Query: 379 REVRGASRDRHR 414
R R SR R R
Sbjct: 1096 RS-RSRSRSRSR 1106
Score = 24.2 bits (50), Expect = 3.6
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 161 QQAKDANLRAEKAEEEARQLQKKIQTIENE 250
QQA+ RA K +EE R L++K Q +E E
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQK-QELERE 849
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 2.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 491 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 384
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 2.7
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -3
Query: 554 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 465
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal
carrier protein AP-2 protein.
Length = 87
Score = 23.4 bits (48), Expect = 6.2
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 71 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAE----KAEEEARQLQKKI 232
K DA K L LD+ A+ KDA + E KA+++A ++ KK+
Sbjct: 24 KDAAKDATDKVKDKAALPDAPKLDKDAVTTPDPKDAAKKVEDAAGKAKDQAAEVGKKL 81
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.4 bits (48), Expect = 6.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 422 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKY 568
SE+S ++DES+ ++ S + EER E+ ++ ++ +E KY
Sbjct: 1926 SESSSSSDESD------DSNSSSSEERKPNREHFFEKQQYTEKECPVKY 1968
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.0 bits (47), Expect = 8.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 18 HHSTRRLDIFSSKGAEKTKPPK 83
HH ++L I SK A PP+
Sbjct: 816 HHDPQKLRIVVSKSANAMHPPR 837
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.0 bits (47), Expect = 8.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 181 VGVFGLLLTHGSAVERI 131
V +FG+LLTHG + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,026
Number of Sequences: 2352
Number of extensions: 9887
Number of successful extensions: 43
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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