Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0039
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.8  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     24   3.8  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   5.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   5.0  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   5.0  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   8.8  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = +2

Query: 422  ELQKLPAFARVASAANMLSH----VGHVILGMNTVQLYMKV 532
            EL KLP+F R A   ++  H    +G  +LG++ +  +M V
Sbjct: 2158 ELMKLPSFPRKALEVDLDLHQGGELGKELLGLDVLHKFMWV 2198


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +2

Query: 104 TLVEAWPDHAVEVRTQLMQSADENWDATGRRRV 202
           T   A+PDH  ++ T L     E W+     R+
Sbjct: 277 TFATAYPDHFEQIATWLSTLESEAWNQANFERL 309


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 144 RTSTAWSGHASTSVFVENSPRSSLRAAV 61
           +T   W G  +   ++ENSP+S+    +
Sbjct: 378 QTGECWIGSRTRVRYIENSPKSAFTGRI 405


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 578 SKSCYFLDVLVCDCRAPSCTT 516
           SK+CY       DC  P C T
Sbjct: 315 SKACYNCPYNATDCERPHCIT 335


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 380 RWCRSGACGRR 348
           RW RSGA GRR
Sbjct: 117 RWTRSGATGRR 127


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 380 RWCRSGACGRR 348
           RW RSGA GRR
Sbjct: 117 RWTRSGATGRR 127


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 215 SHRSHTTVRKYAQYQAGSFQESL 283
           SH+SHTT+ KYA     S  E++
Sbjct: 518 SHKSHTTI-KYALKMLSSSAETI 539


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 347 RAARMLRFGTNVDLSDERKWRPQLAELQKLPAFARVASAANMLSHVG 487
           +++R +R+   V L D  KWR  + ++ +  +    A    M +H G
Sbjct: 785 QSSRSIRY-LGVQLQDHLKWRDHVTKVSEKASRVVAAVTRLMQNHSG 830


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,203
Number of Sequences: 2352
Number of extensions: 11541
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)