Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0001_D16
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF426186-1|ABO26429.1|  133|Anopheles gambiae unknown protein.         24   3.3  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   5.7  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   5.7  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   10.0 

>EF426186-1|ABO26429.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = -3

Query: 552 GRSSGTSCVAT*ACYRFAGGYPTSGSASRSPW 457
           G S GTS       Y+    YPT      +PW
Sbjct: 39  GHSIGTSLGVLRTFYQLGARYPTLTHTCNTPW 70


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 9   ALKKLTTQVLKNNNIDYFVGCTALRASSTWWSNVP 113
           A KK+   +LK   I +FV C+ +   + ++  +P
Sbjct: 254 AFKKIYKTILKLGLIPWFVECSLIAVCARFFLQLP 288


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +3

Query: 489 GNHPQICNMLKLPHKKYRYFDPKTNGFDLQGALEDI 596
           GN+  +  + ++   + RYFD +T   D++  L D+
Sbjct: 324 GNNGTVKTLGQMETVEIRYFDAETQTSDVEKDLRDL 359


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 374 LILNDLAVFTKGQFG 330
           LILN L V+T+G+ G
Sbjct: 486 LILNRLVVYTEGEHG 500


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,768
Number of Sequences: 2352
Number of extensions: 14550
Number of successful extensions: 94
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)