Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_C24
(985 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 40 9e-05
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 38 5e-04
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 38 6e-04
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 37 0.001
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 36 0.002
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 35 0.003
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 35 0.003
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 35 0.003
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 34 0.007
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 33 0.017
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 31 0.053
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 29 0.16
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 24 8.0
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 40.3 bits (90), Expect = 9e-05
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +3
Query: 117 LLATYD---RDSPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDXRLSWNAXEW 287
LL YD R S + V + + H I E +ST+ + ++ +W D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 288 GXSTLAGVLGNAXWTPDXVL 347
G + W PD VL
Sbjct: 106 GNLNVVRWDPTIVWRPDVVL 125
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 37.9 bits (84), Expect = 5e-04
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 105 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDXRLS 269
++++LLATY+ P + V L L+ ++ E + A L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 270 WNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
WN E+G + N W PD ++ S
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 37.5 bits (83), Expect = 6e-04
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Frame = +3
Query: 12 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL 185
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 186 RHANIRESESTVRIQAD---LQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
+ + + + +I ++ +W D +L W E+G + V + W PD VL +
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNN 119
Query: 357 XATXXRGLXRSXARXYIXGL 416
+ A Y GL
Sbjct: 120 ADGNFEVTLATKATIYSEGL 139
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 36.7 bits (81), Expect = 0.001
Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Frame = +3
Query: 12 MSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHL 185
M T+ L +LL+ + A N + L D LL+ Y++ P ++ V+ + + L
Sbjct: 1 MPTSGETLRAWLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKL 59
Query: 186 RHANIRESESTVRIQAD---LQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
+ + + + +I ++ +W D +L W E+G + V + W PD VL
Sbjct: 60 KLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVL 116
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 35.9 bits (79), Expect = 0.002
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Frame = +3
Query: 105 MIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDXR 263
+ D LL+ Y+R P S ++V L L L N+++ T I L+ W D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 264 LSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
W+ E+G T V W PD VL
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVL 124
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 35.1 bits (77), Expect = 0.003
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Frame = +3
Query: 105 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDXRLS 269
++++LLATY+ P + V L L+ ++ E + L + W D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 270 WNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
WN E+G + N W PD ++ S
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLMYNS 115
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 35.1 bits (77), Expect = 0.003
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Frame = +3
Query: 63 ASAAECENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTV 221
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 222 RIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
+ ++ W D +L W E+G + V + W PD VL
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVL 112
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 35.1 bits (77), Expect = 0.003
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 7/88 (7%)
Frame = +3
Query: 105 MIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRESESTVRIQADLQMNWIDXR 263
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84
Query: 264 LSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
L WN ++G V W PD VL
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVL 112
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 33.9 bits (74), Expect = 0.007
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 105 MIDSLLATYDRDSPPDSKIVVNLTLHLRHANIRESESTVRIQAD-----LQMNWIDXRLS 269
+ D LL+ Y+R P LT+ L + E ++R Q ++ W D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 270 WNAXEWGXSTLAGVLGNAXWTPDXVL 347
W+ E+G + V W PD VL
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVL 118
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 32.7 bits (71), Expect = 0.017
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +3
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVL 347
N+ E ++ L++ W D +L W+ ++G + + + W PD VL
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 115
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 31.1 bits (67), Expect = 0.053
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 24 YIILLPFLLTCAIASAAECENATSLSLMIDS---LLATYDRDSPPDSKIVVNLTLHLRHA 194
+II+L + +I A L ++DS L +S P ++ LTL ++
Sbjct: 19 WIIVLMLIANSSILCMAGYNEKRLLHDLLDSYNILERPVVNESDP-LQLSFGLTL-MQII 76
Query: 195 NIRESESTVRIQADLQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
++ E + L++ W D L WN E+G + + W PD ++ S
Sbjct: 77 DVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNS 130
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 29.5 bits (63), Expect = 0.16
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 237 LQMNWIDXRLSWNAXEWGXSTLAGVLGNAXWTPDXVLLXS 356
L++ W D + WN+ E+G + + W PD ++ S
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNS 98
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 23.8 bits (49), Expect = 8.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 250 GSTND*VGTXGSGAXAPWLXSSGTLXG 330
G +D +G G GA P SSG G
Sbjct: 831 GDPSDTIGAGGGGAGGPLRGSSGGAGG 857
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 460,040
Number of Sequences: 2352
Number of extensions: 6424
Number of successful extensions: 23
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107707938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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