Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_C10
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    26   1.3  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   3.0  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   3.0  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   3.0  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   4.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   4.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   4.0  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.2  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -2

Query: 738 GELGFVQLPGEQPARVQEPEPLGRHRVPQRARNHTATPIS 619
           G LG   +PG +P+R   P   G       A  H  TP++
Sbjct: 174 GNLGASGVPGAEPSRGSTPPTPGDDSDSMGASRHGKTPLA 213



 Score = 23.8 bits (49), Expect = 7.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 711 GEQPARVQEPEPLGR 667
           GEQP R+  P P GR
Sbjct: 447 GEQPGRMGPPPPTGR 461


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 297 SLKNTSTP*MRKNTTTMKSRTA 232
           +L+ TSTP +   TTT  +RTA
Sbjct: 422 ALRRTSTPMLSTTTTTTTNRTA 443


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 83  DSPSGCCEGETPRPRSTRSATIXDIN 6
           D P+G  E E PRPR+   + + +++
Sbjct: 102 DYPAGAQEPELPRPRAAIKSPVPEVD 127


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 587 RNWHDLVFRLAEIGVAVWFRARCGTRW 667
           R+  D +  + E G+A + R RCG R+
Sbjct: 573 RSTVDAILAVLEKGIAAFQRKRCGARY 599


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = -2

Query: 675 LGRHRVPQRARNHTATPISA--SRNTRSCQLRDTTGTLVFQNSLRVS 541
           L +  V Q +R HT+T  S+  + NTR+ +   T  T  F NS+ ++
Sbjct: 148 LAKPSVSQPSRTHTSTNASSLNATNTRTTKTASTRRT--FTNSMELT 192


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 190  GRSISDVRCKDLGCQQRVVDEVEGNEG 110
            G    D   +DLG  + + DE EG+EG
Sbjct: 1218 GEEKRDASKEDLGIDEELDDEGEGDEG 1244


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 13/43 (30%), Positives = 16/43 (37%)
 Frame = -1

Query: 607 HQVVPVAGHHRHLSLPEFA*GFRSQEADDQYEHQREADQAHAR 479
           HQ   VA HH HL          +  A  Q + QR +     R
Sbjct: 866 HQAAAVAAHHHHLQHHAAMVAAAAAAAASQEQQQRSSSSQQHR 908


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 541  RSQEADDQYEHQREADQAHARLVQLRQVHGP 449
            RSQ+   Q + Q++  Q   +  Q +Q H P
Sbjct: 1298 RSQQQQQQQQQQQQQQQQQQQQQQQQQQHQP 1328


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,438
Number of Sequences: 2352
Number of extensions: 15374
Number of successful extensions: 61
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)