Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_B13
         (922 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    28   0.46 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    26   1.8  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   2.4  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   3.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    25   3.2  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   9.8  

>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
 Frame = +2

Query: 122 MIDSLLATYDRDSPPELQNRSQP-DPAF*YMLTFV----SPSPPLRIQADLQMNWIDQRL 286
           ++++LLATY+    P + N S P +  F   L  +      +  L   A L + W D  L
Sbjct: 27  LLNNLLATYNTLERP-VANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNL 85

Query: 287 TWNAGEWG 310
            WN  E+G
Sbjct: 86  RWNDSEYG 93


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 257 LQMNWIDQRLTWNAGEWG 310
           L++ W D  L WN  E+G
Sbjct: 91  LKLEWNDMNLRWNTSEYG 108


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 239 LRIQADLQMNWIDQRLTWNAGEWG 310
           L +   ++ +W D +LTWN   +G
Sbjct: 83  LSVYGWMKFSWNDPKLTWNPASYG 106


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 257 LQMNWIDQRLTWNAGEWG 310
           L++ W D  + WN+ E+G
Sbjct: 59  LKLEWNDMNVRWNSSEYG 76


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
 Frame = +2

Query: 122 MIDSLLATYDRDSPPELQNRSQP-DPAF*YMLTFV----SPSPPLRIQADLQMNWIDQRL 286
           ++++LLATY+    P + N S P +  F   L  +      +  L     L + W D  L
Sbjct: 27  LLNNLLATYNTLERP-VANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNL 85

Query: 287 TWNAGEWG 310
            WN  E+G
Sbjct: 86  RWNDSEYG 93


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 257 LQMNWIDQRLTWNAGEWGCSTGL-VSSERL 343
           L+  W D +  W+  E+G  T L V SE +
Sbjct: 88  LEHEWQDHKFKWDPAEYGGVTELYVPSEHI 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,684
Number of Sequences: 2352
Number of extensions: 8276
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)