Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_A19
         (861 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.2  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            24   5.2  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    24   5.2  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    24   6.8  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   9.0  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 536 QRERTVLMWSTRW 574
           +R+RT+ MW ++W
Sbjct: 936 ERQRTITMWQSQW 948


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 371 KSQHFTLSSVEAIKTFVPSSCQATSRT 291
           +S+H+  + +  +  F PSS Q++S T
Sbjct: 649 RSKHYISAEMRTVLIFAPSSNQSSSST 675


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 389 IVWLAAKSQHFTLSSVEAIKTFVPSSCQ 306
           I W A K Q  TLSS EA    +  +C+
Sbjct: 813 ISWSARKQQCVTLSSTEAEYVALAEACR 840


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -2

Query: 494 QNFRVLSQEVVMRHV*LGALIQWQVFTGASCAATCIVWLAAK 369
           Q  +   +E +  +  + A+  WQ+F G   A  C+   AAK
Sbjct: 320 QELKAALKEELQVNAGVTAVSMWQLFDGMKRARLCLPTKAAK 361


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = -1

Query: 264 RHCFPRSFHFPTSHLAVPAASDQEGVQSDGGRRE-LEGR-HGVIGRRGNLHVLVGVV 100
           R C   S + PTS      +   E   S GG+RE L+ +  G + +       VGVV
Sbjct: 215 RDCPMESNNTPTSTTMRDYSRKNENCSSSGGQRESLKPKPKGKVAKSSEFSFTVGVV 271


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 889,856
Number of Sequences: 2352
Number of extensions: 18946
Number of successful extensions: 52
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)