Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40067
         (453 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic ri...    94   2e-19
BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, larg...    94   2e-19
BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, larg...    94   2e-19
AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal phosph...    94   2e-19
AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1 pr...    94   2e-19
CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.                94   2e-19
CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.                87   2e-17
AK128281-1|BAC87365.1|  121|Homo sapiens protein ( Homo sapiens ...    29   7.4  
M17887-1|AAA36472.1|  115|Homo sapiens protein ( Human acidic ri...    29   9.8  
CR542248-1|CAG47044.1|  115|Homo sapiens RPLP2 protein.                29   9.8  
CR542212-1|CAG47008.1|  115|Homo sapiens RPLP2 protein.                29   9.8  
BC062314-1|AAH62314.1|  115|Homo sapiens ribosomal protein, larg...    29   9.8  
BC007573-1|AAH07573.1|  115|Homo sapiens ribosomal protein, larg...    29   9.8  
BC005920-1|AAH05920.1|  115|Homo sapiens ribosomal protein, larg...    29   9.8  
BC005354-1|AAH05354.1|  115|Homo sapiens ribosomal protein, larg...    29   9.8  
AB061837-1|BAB79475.1|  115|Homo sapiens ribosomal protein P2 pr...    29   9.8  

>M17886-1|AAA36471.1|  114|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P1 mRNA, complete cds. ).
          Length = 114

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 26  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 205
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 206 TNIGSG 223
            N+G+G
Sbjct: 61  CNVGAG 66



 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 104 SDDDMGFGLFD 114


>BC007590-1|AAH07590.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 26  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 205
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 206 TNIGSG 223
            N+G+G
Sbjct: 61  CNVGAG 66



 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 104 SDDDMGFGLFD 114


>BC003369-1|AAH03369.1|  114|Homo sapiens ribosomal protein, large,
           P1 protein.
          Length = 114

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 26  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 205
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 206 TNIGSG 223
            N+G+G
Sbjct: 61  CNVGAG 66



 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 104 SDDDMGFGLFD 114


>AY303789-1|AAP68820.1|  113|Homo sapiens acidic ribosomal
           phosphoprotein P1 protein.
          Length = 113

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 26  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 205
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 206 TNIGSG 223
            N+G+G
Sbjct: 61  CNVGAG 66


>AB061836-1|BAB79474.1|  114|Homo sapiens ribosomal protein P1
           protein.
          Length = 114

 Score = 94.3 bits (224), Expect = 2e-19
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 26  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 205
           M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 206 TNIGSG 223
            N+G+G
Sbjct: 61  CNVGAG 66



 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 104 SDDDMGFGLFD 114


>CR450339-1|CAG29335.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 93.9 bits (223), Expect = 2e-19
 Identities = 40/66 (60%), Positives = 54/66 (81%)
 Frame = +2

Query: 26  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 205
           M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 206 TNIGSG 223
            N+G+G
Sbjct: 61  CNVGAG 66



 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 104 SDDDMGFGLFD 114


>CR542209-1|CAG47005.1|  114|Homo sapiens RPLP1 protein.
          Length = 114

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 39/66 (59%), Positives = 53/66 (80%)
 Frame = +2

Query: 26  MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKALEGINVRDLI 205
           M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAKAL  +N+  LI
Sbjct: 1   MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLI 60

Query: 206 TNIGSG 223
            ++G+G
Sbjct: 61  CDVGAG 66



 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 104 SDDDMGFGLFD 114


>AK128281-1|BAC87365.1|  121|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46418 fis, clone THYMU3012907. ).
          Length = 121

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -2

Query: 194 GH*CLPRLWRTDLANMA--LHLQPPLSRWWKFSHQLRQHHHPPG 69
           GH CLP   ++ LA  +  +H Q  L   W   HQ     HPPG
Sbjct: 5   GHCCLPGGAKSGLAGSSAPVHRQGRLRTVWAPQHQRVAPWHPPG 48


>M17887-1|AAA36472.1|  115|Homo sapiens protein ( Human acidic
           ribosomal phosphoprotein P2 mRNA, complete cds. ).
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


>CR542248-1|CAG47044.1|  115|Homo sapiens RPLP2 protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


>CR542212-1|CAG47008.1|  115|Homo sapiens RPLP2 protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


>BC062314-1|AAH62314.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


>BC007573-1|AAH07573.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


>BC005920-1|AAH05920.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


>BC005354-1|AAH05354.1|  115|Homo sapiens ribosomal protein, large,
           P2 protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


>AB061837-1|BAB79475.1|  115|Homo sapiens ribosomal protein P2
           protein.
          Length = 115

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +1

Query: 328 SDDDMGFGLFD 360
           SDDDMGFGLFD
Sbjct: 105 SDDDMGFGLFD 115


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,410,768
Number of Sequences: 237096
Number of extensions: 984462
Number of successful extensions: 1631
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)