Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40041
(887 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22957-1|CAA80533.1| 812|Homo sapiens myosin I homologue protein. 31 4.2
Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 pro... 31 4.2
Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 pro... 31 4.2
U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 pro... 31 4.2
BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor pote... 31 4.2
BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor pote... 31 4.2
AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor pote... 31 4.2
AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor pote... 31 4.2
AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor pote... 31 4.2
AB209505-1|BAD92742.1| 1409|Homo sapiens Myosin Va variant protein. 31 4.2
AB209487-1|BAD92724.1| 1409|Homo sapiens Myosin Va variant protein. 31 4.2
BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (S... 31 5.6
AY007138-1|AAG01999.1| 393|Homo sapiens protein ( Homo sapiens ... 31 5.6
AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor pote... 31 5.6
AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein. 31 5.6
>Z22957-1|CAA80533.1| 812|Homo sapiens myosin I homologue protein.
Length = 812
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 321 MTSSELTTRLKIDAMSEDSRTDYDESHYDCYKQAKENDLAEFDSISSILKNKAETLNH 494
++ E +L+ D S E H D YKQ E ++ +++LK + E LNH
Sbjct: 348 LSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQETEQLVSNLKEENTLLKQEKEALNH 405
>Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 protein.
Length = 1828
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 321 MTSSELTTRLKIDAMSEDSRTDYDESHYDCYKQAKENDLAEFDSISSILKNKAETLNH 494
++ E +L+ D S E H D YKQ E ++ +++LK + E LNH
Sbjct: 986 LSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQETEQLVSNLKEENTLLKQEKEALNH 1043
>Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 protein.
Length = 1855
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 321 MTSSELTTRLKIDAMSEDSRTDYDESHYDCYKQAKENDLAEFDSISSILKNKAETLNH 494
++ E +L+ D S E H D YKQ E ++ +++LK + E LNH
Sbjct: 986 LSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQETEQLVSNLKEENTLLKQEKEALNH 1043
>U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 protein.
Length = 1855
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 321 MTSSELTTRLKIDAMSEDSRTDYDESHYDCYKQAKENDLAEFDSISSILKNKAETLNH 494
++ E +L+ D S E H D YKQ E ++ +++LK + E LNH
Sbjct: 986 LSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQETEQLVSNLKEENTLLKQEKEALNH 1043
>BC093660-1|AAH93660.1| 931|Homo sapiens transient receptor
potential cation channel, subfamily C, member 6 protein.
Length = 931
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 240 RYRFSLYDGLGQPATIAASSETSGVYTMTSSELTTRLKIDA-MSEDSRTDYDESHYDC-- 410
R R + Y GL PA ++ SSE MT+ EL+ L + A + ++ + DY + C
Sbjct: 271 RSRINAYKGLASPAYLSLSSEDP---VMTALELSNELAVLANIEKEFKNDYKKLSMQCKD 327
Query: 411 YKQAKENDLAEFDSISSILKNKAETL 488
+ + + + +IL ETL
Sbjct: 328 FVVGLLDLCRNTEEVEAILNGDVETL 353
>BC093658-1|AAH93658.1| 931|Homo sapiens transient receptor
potential cation channel, subfamily C, member 6 protein.
Length = 931
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 240 RYRFSLYDGLGQPATIAASSETSGVYTMTSSELTTRLKIDA-MSEDSRTDYDESHYDC-- 410
R R + Y GL PA ++ SSE MT+ EL+ L + A + ++ + DY + C
Sbjct: 271 RSRINAYKGLASPAYLSLSSEDP---VMTALELSNELAVLANIEKEFKNDYKKLSMQCKD 327
Query: 411 YKQAKENDLAEFDSISSILKNKAETL 488
+ + + + +IL ETL
Sbjct: 328 FVVGLLDLCRNTEEVEAILNGDVETL 353
>AJ271066-1|CAC01684.1| 931|Homo sapiens transient receptor
potential channel 6 protein.
Length = 931
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 240 RYRFSLYDGLGQPATIAASSETSGVYTMTSSELTTRLKIDA-MSEDSRTDYDESHYDC-- 410
R R + Y GL PA ++ SSE MT+ EL+ L + A + ++ + DY + C
Sbjct: 271 RSRINAYKGLASPAYLSLSSEDP---VMTALELSNELAVLANIEKEFKNDYKKLSMQCKD 327
Query: 411 YKQAKENDLAEFDSISSILKNKAETL 488
+ + + + +IL ETL
Sbjct: 328 FVVGLLDLCRNTEEVEAILNGDVETL 353
>AJ006276-1|CAA06943.1| 931|Homo sapiens transient receptor
potential protein protein.
Length = 931
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 240 RYRFSLYDGLGQPATIAASSETSGVYTMTSSELTTRLKIDA-MSEDSRTDYDESHYDC-- 410
R R + Y GL PA ++ SSE MT+ EL+ L + A + ++ + DY + C
Sbjct: 271 RSRINAYKGLASPAYLSLSSEDP---VMTALELSNELAVLANIEKEFKNDYKKLSMQCKD 327
Query: 411 YKQAKENDLAEFDSISSILKNKAETL 488
+ + + + +IL ETL
Sbjct: 328 FVVGLLDLCRNTEEVEAILNGDVETL 353
>AF080394-1|AAC63289.2| 931|Homo sapiens transient receptor
potential protein 6 protein.
Length = 931
Score = 31.5 bits (68), Expect = 4.2
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 240 RYRFSLYDGLGQPATIAASSETSGVYTMTSSELTTRLKIDA-MSEDSRTDYDESHYDC-- 410
R R + Y GL PA ++ SSE MT+ EL+ L + A + ++ + DY + C
Sbjct: 271 RSRINAYKGLASPAYLSLSSEDP---VMTALELSNELAVLANIEKEFKNDYKKLSMQCKD 327
Query: 411 YKQAKENDLAEFDSISSILKNKAETL 488
+ + + + +IL ETL
Sbjct: 328 FVVGLLDLCRNTEEVEAILNGDVETL 353
>AB209505-1|BAD92742.1| 1409|Homo sapiens Myosin Va variant protein.
Length = 1409
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 321 MTSSELTTRLKIDAMSEDSRTDYDESHYDCYKQAKENDLAEFDSISSILKNKAETLNH 494
++ E +L+ D S E H D YKQ E ++ +++LK + E LNH
Sbjct: 567 LSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQETEQLVSNLKEENTLLKQEKEALNH 624
>AB209487-1|BAD92724.1| 1409|Homo sapiens Myosin Va variant protein.
Length = 1409
Score = 31.5 bits (68), Expect = 4.2
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 321 MTSSELTTRLKIDAMSEDSRTDYDESHYDCYKQAKENDLAEFDSISSILKNKAETLNH 494
++ E +L+ D S E H D YKQ E ++ +++LK + E LNH
Sbjct: 567 LSLQEEIAKLRKDLEQTRSEKKCIEEHADRYKQETEQLVSNLKEENTLLKQEKEALNH 624
>BC025276-1|AAH25276.2| 556|Homo sapiens UTP18, small subunit (SSU)
processome component, homolog (yeast) protein.
Length = 556
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 700 IKSLNPLAVK*VMLITVGVTSVSMERTSTYVGVCSSSKKYNVFFIVIPDWHTSMNHQ--R 527
++ NP +K +M + GVTS++ T+ + + S K V + +P N +
Sbjct: 458 LQETNPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIK 517
Query: 526 NRNLA 512
N+N++
Sbjct: 518 NKNIS 522
>AY007138-1|AAG01999.1| 393|Homo sapiens protein ( Homo sapiens
clone CDABP0061 mRNA sequence. ).
Length = 393
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 700 IKSLNPLAVK*VMLITVGVTSVSMERTSTYVGVCSSSKKYNVFFIVIPDWHTSMNHQ--R 527
++ NP +K +M + GVTS++ T+ + + S K V + +P N +
Sbjct: 295 LQETNPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIK 354
Query: 526 NRNLA 512
N+N++
Sbjct: 355 NKNIS 359
>AJ271068-1|CAC01686.1| 876|Homo sapiens transient receptor
potential channel 6, variant delta377-431 protein.
Length = 876
Score = 31.1 bits (67), Expect = 5.6
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 240 RYRFSLYDGLGQPATIAASSETSGVYTMTSSELTTRLKIDA-MSEDSRTDYDESHYDC 410
R R + Y GL PA ++ SSE MT+ EL+ L + A + ++ + DY + C
Sbjct: 271 RSRINAYKGLASPAYLSLSSEDP---VMTALELSNELAVLANIEKEFKNDYKKLSMQC 325
>AF151806-1|AAD34043.1| 521|Homo sapiens CGI-48 protein protein.
Length = 521
Score = 31.1 bits (67), Expect = 5.6
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = -2
Query: 700 IKSLNPLAVK*VMLITVGVTSVSMERTSTYVGVCSSSKKYNVFFIVIPDWHTSMNHQ--R 527
++ NP +K +M + GVTS++ T+ + + S K V + +P N +
Sbjct: 434 LQETNPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPSCTVFSNFPVIK 493
Query: 526 NRNLA 512
N+N++
Sbjct: 494 NKNIS 498
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,382,895
Number of Sequences: 237096
Number of extensions: 1769485
Number of successful extensions: 2733
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2733
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11381686510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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