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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00034
         (681 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L42451-1|AAC42010.1|  407|Homo sapiens pyruvate dehydrogenase ki...   105   1e-22
BC063137-1|AAH63137.1|  407|Homo sapiens pyruvate dehydrogenase ...   105   1e-22
BC040478-1|AAH40478.1|  407|Homo sapiens pyruvate dehydrogenase ...   105   1e-22
BC005811-1|AAH05811.1|  407|Homo sapiens pyruvate dehydrogenase ...   105   1e-22
L42450-1|AAC42009.1|  436|Homo sapiens pyruvate dehydrogenase ki...   105   1e-22
DQ234350-1|ABB29979.1|  456|Homo sapiens mitochondrial pyruvate ...   105   1e-22
BC039158-1|AAH39158.1|  436|Homo sapiens PDK1 protein protein.        105   1e-22
AC093818-1|AAY14915.1|  390|Homo sapiens unknown protein.             105   1e-22
U54628-1|AAC50670.1|  411|Homo sapiens pyruvate dehydrogenase ki...   101   3e-21
U54617-1|AAC50669.1|  411|Homo sapiens pyruvate dehydrogenase ki...   101   3e-21
BC040239-1|AAH40239.1|  411|Homo sapiens PDK4 protein protein.        101   3e-21
AK223328-1|BAD97048.1|  411|Homo sapiens pyruvate dehydrogenase ...   101   3e-21
AC002451-1|AAB67048.1|  411|Homo sapiens unknown protein.             101   3e-21
L42452-1|AAC42011.1|  406|Homo sapiens pyruvate dehydrogenase ki...    92   1e-18
BC015948-1|AAH15948.1|  406|Homo sapiens pyruvate dehydrogenase ...    92   1e-18
CR542093-1|CAG46890.1|  412|Homo sapiens BCKDK protein.                43   9e-04
BC007363-1|AAH07363.1|  412|Homo sapiens branched chain ketoacid...    43   9e-04
AF026548-1|AAB82714.1|  412|Homo sapiens branched chain alpha-ke...    43   9e-04
BC009872-1|AAH09872.1|  335|Homo sapiens BCKDK protein protein.        34   0.54 
AY273815-1|AAQ16156.1| 2623|Homo sapiens bone specific CMF608 pr...    31   3.8  
BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated prot...    30   6.6  
BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.     30   6.6  
BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated prot...    30   6.6  
BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated prot...    30   6.6  
BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated prot...    30   6.6  
AL158013-1|CAH71494.1|  354|Homo sapiens NK2 transcription facto...    30   6.6  
AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated prot...    30   6.6  
AF202037-1|AAG35617.1|  289|Homo sapiens homeobox transcription ...    30   6.6  
AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated prot...    30   6.6  
AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated prot...    30   6.6  

>L42451-1|AAC42010.1|  407|Homo sapiens pyruvate dehydrogenase
           kinase protein.
          Length = 407

 Score =  105 bits (253), Expect = 1e-22
 Identities = 48/86 (55%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DAY+ A+ LCD+YY+ASP+LE+ + +  +S +P+ +VYVPSHLYHMLFELFKNAMRA +E
Sbjct: 203 DAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVE 262

Query: 438 NHGTA--PPPIQVNLVNGKEDISVKI 509
           +H ++   PPI+V +  G+ED+S+K+
Sbjct: 263 SHESSLILPPIKVMVALGEEDLSIKM 288



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP +  +IQYFLDRFY+SRISIRMLINQHTL+F         S N      +HIGSIDP 
Sbjct: 144 DPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF-------DGSTNPA--HPKHIGSIDPN 194

Query: 238 CDVVAVL 258
           C+V  V+
Sbjct: 195 CNVSEVV 201



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP P      T PLAG+GYGLP
Sbjct: 304 FSYMYSTAPTPQPGTGGT-PLAGFGYGLP 331


>BC063137-1|AAH63137.1|  407|Homo sapiens pyruvate dehydrogenase
           kinase, isozyme 2 protein.
          Length = 407

 Score =  105 bits (253), Expect = 1e-22
 Identities = 48/86 (55%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DAY+ A+ LCD+YY+ASP+LE+ + +  +S +P+ +VYVPSHLYHMLFELFKNAMRA +E
Sbjct: 203 DAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVE 262

Query: 438 NHGTA--PPPIQVNLVNGKEDISVKI 509
           +H ++   PPI+V +  G+ED+S+K+
Sbjct: 263 SHESSLILPPIKVMVALGEEDLSIKM 288



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP +  +IQYFLDRFY+SRISIRMLINQHTL+F         S N      +HIGSIDP 
Sbjct: 144 DPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF-------DGSTNPA--HPKHIGSIDPN 194

Query: 238 CDVVAVL 258
           C+V  V+
Sbjct: 195 CNVSEVV 201



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP P      T PLAG+GYGLP
Sbjct: 304 FSYMYSTAPTPQPGTGGT-PLAGFGYGLP 331


>BC040478-1|AAH40478.1|  407|Homo sapiens pyruvate dehydrogenase
           kinase, isozyme 2 protein.
          Length = 407

 Score =  105 bits (253), Expect = 1e-22
 Identities = 48/86 (55%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DAY+ A+ LCD+YY+ASP+LE+ + +  +S +P+ +VYVPSHLYHMLFELFKNAMRA +E
Sbjct: 203 DAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVE 262

Query: 438 NHGTA--PPPIQVNLVNGKEDISVKI 509
           +H ++   PPI+V +  G+ED+S+K+
Sbjct: 263 SHESSLILPPIKVMVALGEEDLSIKM 288



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP +  +IQYFLDRFY+SRISIRMLINQHTL+F         S N      +HIGSIDP 
Sbjct: 144 DPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF-------DGSTNPA--HPKHIGSIDPN 194

Query: 238 CDVVAVL 258
           C+V  V+
Sbjct: 195 CNVSEVV 201



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP P      T PLAG+GYGLP
Sbjct: 304 FSYMYSTAPTPQPGTGGT-PLAGFGYGLP 331


>BC005811-1|AAH05811.1|  407|Homo sapiens pyruvate dehydrogenase
           kinase, isozyme 2 protein.
          Length = 407

 Score =  105 bits (253), Expect = 1e-22
 Identities = 48/86 (55%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DAY+ A+ LCD+YY+ASP+LE+ + +  +S +P+ +VYVPSHLYHMLFELFKNAMRA +E
Sbjct: 203 DAYDMAKLLCDKYYMASPDLEIQEINAANSKQPIHMVYVPSHLYHMLFELFKNAMRATVE 262

Query: 438 NHGTA--PPPIQVNLVNGKEDISVKI 509
           +H ++   PPI+V +  G+ED+S+K+
Sbjct: 263 SHESSLILPPIKVMVALGEEDLSIKM 288



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP +  +IQYFLDRFY+SRISIRMLINQHTL+F         S N      +HIGSIDP 
Sbjct: 144 DPVSNQNIQYFLDRFYLSRISIRMLINQHTLIF-------DGSTNPA--HPKHIGSIDPN 194

Query: 238 CDVVAVL 258
           C+V  V+
Sbjct: 195 CNVSEVV 201



 Score = 42.3 bits (95), Expect = 0.002
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP P      T PLAG+GYGLP
Sbjct: 304 FSYMYSTAPTPQPGTGGT-PLAGFGYGLP 331


>L42450-1|AAC42009.1|  436|Homo sapiens pyruvate dehydrogenase
           kinase protein.
          Length = 436

 Score =  105 bits (252), Expect = 1e-22
 Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           D YENAR LCD YY+ SPELE+ + +  S  +P+ +VYVPSHLYHM+FELFKNAMRA ME
Sbjct: 231 DGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATME 290

Query: 438 NHGT--APPPIQVNLVNGKEDISVKI 509
           +H      PPIQV++  G ED++VK+
Sbjct: 291 HHANRGVYPPIQVHVTLGNEDLTVKM 316



 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYMSRISIRML+NQH+LLFG +  GK     G  +  +HIGSI+P 
Sbjct: 170 DPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGK--GK-----GSPSHRKHIGSINPN 222

Query: 238 CDVVAVL 258
           C+V+ V+
Sbjct: 223 CNVLEVI 229



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP+P    S  VPLAG+GYGLP
Sbjct: 332 FNYMYSTAPRPRVETSRAVPLAGFGYGLP 360


>DQ234350-1|ABB29979.1|  456|Homo sapiens mitochondrial pyruvate
           dehydrogenase kinase isoenzyme 1 protein.
          Length = 456

 Score =  105 bits (252), Expect = 1e-22
 Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           D YENAR LCD YY+ SPELE+ + +  S  +P+ +VYVPSHLYHM+FELFKNAMRA ME
Sbjct: 251 DGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATME 310

Query: 438 NHGT--APPPIQVNLVNGKEDISVKI 509
           +H      PPIQV++  G ED++VK+
Sbjct: 311 HHANRGVYPPIQVHVTLGNEDLTVKM 336



 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYMSRISIRML+NQH+LLFG +  GK     G  +  +HIGSI+P 
Sbjct: 190 DPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGK--GK-----GSPSHRKHIGSINPN 242

Query: 238 CDVVAVL 258
           C+V+ V+
Sbjct: 243 CNVLEVI 249



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP+P    S  VPLAG+GYGLP
Sbjct: 352 FNYMYSTAPRPRVETSRAVPLAGFGYGLP 380


>BC039158-1|AAH39158.1|  436|Homo sapiens PDK1 protein protein.
          Length = 436

 Score =  105 bits (252), Expect = 1e-22
 Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           D YENAR LCD YY+ SPELE+ + +  S  +P+ +VYVPSHLYHM+FELFKNAMRA ME
Sbjct: 231 DGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATME 290

Query: 438 NHGT--APPPIQVNLVNGKEDISVKI 509
           +H      PPIQV++  G ED++VK+
Sbjct: 291 HHANRGVYPPIQVHVTLGNEDLTVKM 316



 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYMSRISIRML+NQH+LLFG +  GK     G  +  +HIGSI+P 
Sbjct: 170 DPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGK--GK-----GSPSHRKHIGSINPN 222

Query: 238 CDVVAVL 258
           C+V+ V+
Sbjct: 223 CNVLEVI 229



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP+P    S  VPLAG+GYGLP
Sbjct: 332 FNYMYSTAPRPRVETSRAVPLAGFGYGLP 360


>AC093818-1|AAY14915.1|  390|Homo sapiens unknown protein.
          Length = 390

 Score =  105 bits (252), Expect = 1e-22
 Identities = 51/86 (59%), Positives = 65/86 (75%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           D YENAR LCD YY+ SPELE+ + +  S  +P+ +VYVPSHLYHM+FELFKNAMRA ME
Sbjct: 231 DGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELFKNAMRATME 290

Query: 438 NHGT--APPPIQVNLVNGKEDISVKI 509
           +H      PPIQV++  G ED++VK+
Sbjct: 291 HHANRGVYPPIQVHVTLGNEDLTVKM 316



 Score = 75.8 bits (178), Expect = 1e-13
 Identities = 39/67 (58%), Positives = 50/67 (74%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYMSRISIRML+NQH+LLFG +  GK     G  +  +HIGSI+P 
Sbjct: 170 DPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGK--GK-----GSPSHRKHIGSINPN 222

Query: 238 CDVVAVL 258
           C+V+ V+
Sbjct: 223 CNVLEVI 229



 Score = 48.8 bits (111), Expect = 2e-05
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP+P    S  VPLAG+GYGLP
Sbjct: 332 FNYMYSTAPRPRVETSRAVPLAGFGYGLP 360


>U54628-1|AAC50670.1|  411|Homo sapiens pyruvate dehydrogenase
           kinase isoform 4 protein.
          Length = 411

 Score =  101 bits (241), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DA+E +R LCD+YYL+SPEL++ Q +G    +P+ IVYVPSHL+HMLFELFKNAMRA +E
Sbjct: 206 DAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVE 265

Query: 438 NHGTAP--PPIQVNLVNGKEDISVKI 509
           +    P   PI+V +V GKED+++KI
Sbjct: 266 HQENQPSLTPIEVIVVLGKEDLTIKI 291



 Score = 72.9 bits (171), Expect = 9e-13
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYM+RIS RML+NQH L+F +   G  +          HIGSIDP 
Sbjct: 148 DPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPS----------HIGSIDPN 197

Query: 238 CDVVAVL 258
           CDVVAV+
Sbjct: 198 CDVVAVV 204



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F Y YSTAP P   +S   PLAG+GYGLP
Sbjct: 307 FSYTYSTAPTPVMDNSRNAPLAGFGYGLP 335



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +2

Query: 509 SDRGGGIPRSVGASVXXXXXXXXXXXXXXXXXXXXXXVTDTGCLISRLYARYFHGDL 679
           SDRGGG+P  +   +                          G  ISRLYA+YF GDL
Sbjct: 292 SDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDL 348


>U54617-1|AAC50669.1|  411|Homo sapiens pyruvate dehydrogenase
           kinase isoform 4 protein.
          Length = 411

 Score =  101 bits (241), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DA+E +R LCD+YYL+SPEL++ Q +G    +P+ IVYVPSHL+HMLFELFKNAMRA +E
Sbjct: 206 DAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVE 265

Query: 438 NHGTAP--PPIQVNLVNGKEDISVKI 509
           +    P   PI+V +V GKED+++KI
Sbjct: 266 HQENQPSLTPIEVIVVLGKEDLTIKI 291



 Score = 72.9 bits (171), Expect = 9e-13
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYM+RIS RML+NQH L+F +   G  +          HIGSIDP 
Sbjct: 148 DPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPS----------HIGSIDPN 197

Query: 238 CDVVAVL 258
           CDVVAV+
Sbjct: 198 CDVVAVV 204



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F Y YSTAP P   +S   PLAG+GYGLP
Sbjct: 307 FSYTYSTAPTPVMDNSRNAPLAGFGYGLP 335



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +2

Query: 509 SDRGGGIPRSVGASVXXXXXXXXXXXXXXXXXXXXXXVTDTGCLISRLYARYFHGDL 679
           SDRGGG+P  +   +                          G  ISRLYA+YF GDL
Sbjct: 292 SDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDL 348


>BC040239-1|AAH40239.1|  411|Homo sapiens PDK4 protein protein.
          Length = 411

 Score =  101 bits (241), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DA+E +R LCD+YYL+SPEL++ Q +G    +P+ IVYVPSHL+HMLFELFKNAMRA +E
Sbjct: 206 DAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVE 265

Query: 438 NHGTAP--PPIQVNLVNGKEDISVKI 509
           +    P   PI+V +V GKED+++KI
Sbjct: 266 HQENQPSLTPIEVIVVLGKEDLTIKI 291



 Score = 72.9 bits (171), Expect = 9e-13
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYM+RIS RML+NQH L+F +   G  +          HIGSIDP 
Sbjct: 148 DPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPS----------HIGSIDPN 197

Query: 238 CDVVAVL 258
           CDVVAV+
Sbjct: 198 CDVVAVV 204



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F Y YSTAP P   +S   PLAG+GYGLP
Sbjct: 307 FSYTYSTAPTPVMDNSRNAPLAGFGYGLP 335



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +2

Query: 509 SDRGGGIPRSVGASVXXXXXXXXXXXXXXXXXXXXXXVTDTGCLISRLYARYFHGDL 679
           SDRGGG+P  +   +                          G  ISRLYA+YF GDL
Sbjct: 292 SDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDL 348


>AK223328-1|BAD97048.1|  411|Homo sapiens pyruvate dehydrogenase
           kinase, isoenzyme 4 variant protein.
          Length = 411

 Score =  101 bits (241), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DA+E +R LCD+YYL+SPEL++ Q +G    +P+ IVYVPSHL+HMLFELFKNAMRA +E
Sbjct: 206 DAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVE 265

Query: 438 NHGTAP--PPIQVNLVNGKEDISVKI 509
           +    P   PI+V +V GKED+++KI
Sbjct: 266 HQENQPSLTPIEVIVVLGKEDLTIKI 291



 Score = 72.9 bits (171), Expect = 9e-13
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYM+RIS RML+NQH L+F +   G  +          HIGSIDP 
Sbjct: 148 DPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPS----------HIGSIDPN 197

Query: 238 CDVVAVL 258
           CDVVAV+
Sbjct: 198 CDVVAVV 204



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F Y YSTAP P   +S   PLAG+GYGLP
Sbjct: 307 FSYTYSTAPTPVMDNSRNAPLAGFGYGLP 335



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +2

Query: 509 SDRGGGIPRSVGASVXXXXXXXXXXXXXXXXXXXXXXVTDTGCLISRLYARYFHGDL 679
           SDRGGG+P  +   +                          G  ISRLYA+YF GDL
Sbjct: 292 SDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDL 348


>AC002451-1|AAB67048.1|  411|Homo sapiens unknown protein.
          Length = 411

 Score =  101 bits (241), Expect = 3e-21
 Identities = 50/86 (58%), Positives = 67/86 (77%), Gaps = 3/86 (3%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQ-DGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVME 437
           DA+E +R LCD+YYL+SPEL++ Q +G    +P+ IVYVPSHL+HMLFELFKNAMRA +E
Sbjct: 206 DAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFKNAMRATVE 265

Query: 438 NHGTAP--PPIQVNLVNGKEDISVKI 509
           +    P   PI+V +V GKED+++KI
Sbjct: 266 HQENQPSLTPIEVIVVLGKEDLTIKI 291



 Score = 72.9 bits (171), Expect = 9e-13
 Identities = 37/67 (55%), Positives = 45/67 (67%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP T  ++QYFLDRFYM+RIS RML+NQH L+F +   G  +          HIGSIDP 
Sbjct: 148 DPVTNQNLQYFLDRFYMNRISTRMLMNQHILIFSDSQTGNPS----------HIGSIDPN 197

Query: 238 CDVVAVL 258
           CDVVAV+
Sbjct: 198 CDVVAVV 204



 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F Y YSTAP P   +S   PLAG+GYGLP
Sbjct: 307 FSYTYSTAPTPVMDNSRNAPLAGFGYGLP 335



 Score = 31.5 bits (68), Expect = 2.9
 Identities = 19/57 (33%), Positives = 23/57 (40%)
 Frame = +2

Query: 509 SDRGGGIPRSVGASVXXXXXXXXXXXXXXXXXXXXXXVTDTGCLISRLYARYFHGDL 679
           SDRGGG+P  +   +                          G  ISRLYA+YF GDL
Sbjct: 292 SDRGGGVPLRIIDRLFSYTYSTAPTPVMDNSRNAPLAGFGYGLPISRLYAKYFQGDL 348


>L42452-1|AAC42011.1|  406|Homo sapiens pyruvate dehydrogenase
           kinase protein.
          Length = 406

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQDGVSSL-RPMPIVYVPSHLYHMLFELFKNAMRAVM- 434
           DAYE A+ LC++YYL +PELEV +    +  +P+ +VYVPSHL+HMLFELFKN+MRA + 
Sbjct: 199 DAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVE 258

Query: 435 --ENHGTAPPPIQVNLVNGKEDISVKI 509
             E+     P ++  +  GKED+S+KI
Sbjct: 259 LYEDRKEGYPAVKTLVTLGKEDLSIKI 285



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 44/67 (65%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP    +IQYFLDRFY +RIS RMLINQHTLLF    GG    V+      +HIGSIDP 
Sbjct: 140 DPFISTNIQYFLDRFYTNRISFRMLINQHTLLF----GGDTNPVH-----PKHIGSIDPT 190

Query: 238 CDVVAVL 258
           C+V  V+
Sbjct: 191 CNVADVV 197



 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP+PS   +   PLAG+GYGLP
Sbjct: 301 FNYMYSTAPRPSLEPTRAAPLAGFGYGLP 329



 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +2

Query: 632 GCLISRLYARYFHGDL 679
           G  ISRLYARYF GDL
Sbjct: 327 GLPISRLYARYFQGDL 342


>BC015948-1|AAH15948.1|  406|Homo sapiens pyruvate dehydrogenase
           kinase, isozyme 3 protein.
          Length = 406

 Score = 92.3 bits (219), Expect = 1e-18
 Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
 Frame = +3

Query: 261 DAYENARFLCDRYYLASPELEVLQDGVSSL-RPMPIVYVPSHLYHMLFELFKNAMRAVM- 434
           DAYE A+ LC++YYL +PELEV +    +  +P+ +VYVPSHL+HMLFELFKN+MRA + 
Sbjct: 199 DAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVE 258

Query: 435 --ENHGTAPPPIQVNLVNGKEDISVKI 509
             E+     P ++  +  GKED+S+KI
Sbjct: 259 LYEDRKEGYPAVKTLVTLGKEDLSIKI 285



 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 38/67 (56%), Positives = 44/67 (65%)
 Frame = +1

Query: 58  DPGTENSIQYFLDRFYMSRISIRMLINQHTLLFGEQLGGKQASVNGIGNGGRHIGSIDPA 237
           DP    +IQYFLDRFY +RIS RMLINQHTLLF    GG    V+      +HIGSIDP 
Sbjct: 140 DPFISTNIQYFLDRFYTNRISFRMLINQHTLLF----GGDTNPVH-----PKHIGSIDPT 190

Query: 238 CDVVAVL 258
           C+V  V+
Sbjct: 191 CNVADVV 197



 Score = 48.0 bits (109), Expect = 3e-05
 Identities = 19/29 (65%), Positives = 22/29 (75%)
 Frame = +1

Query: 553 FKYMYSTAPQPSKSDSHTVPLAGYGYGLP 639
           F YMYSTAP+PS   +   PLAG+GYGLP
Sbjct: 301 FNYMYSTAPRPSLEPTRAAPLAGFGYGLP 329



 Score = 29.9 bits (64), Expect = 8.8
 Identities = 13/16 (81%), Positives = 13/16 (81%)
 Frame = +2

Query: 632 GCLISRLYARYFHGDL 679
           G  ISRLYARYF GDL
Sbjct: 327 GLPISRLYARYFQGDL 342


>CR542093-1|CAG46890.1|  412|Homo sapiens BCKDK protein.
          Length = 412

 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +3

Query: 276 ARFLCDRYYLASPELEVLQDGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVMENHGTAP 455
           AR LC+  Y  +P + +  +G  + R     ++P  L ++L EL KNAMRA ME+H   P
Sbjct: 238 ARRLCEHKYGNAPRVRI--NGHVAAR---FPFIPMPLDYILPELLKNAMRATMESHLDTP 292

Query: 456 ---PPIQVNLVNGKEDISVKI 509
              P + + + N   D+ ++I
Sbjct: 293 YNVPDVVITIANNDVDLIIRI 313



 Score = 33.9 bits (74), Expect = 0.54
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 31  ARAERVSRRDPGTENSIQYFLDRFYMSRISIRMLINQHTLL 153
           A   R SR+    E  ++YFLD+   SR+ IRML   H  L
Sbjct: 170 AEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 210


>BC007363-1|AAH07363.1|  412|Homo sapiens branched chain ketoacid
           dehydrogenase kinase protein.
          Length = 412

 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +3

Query: 276 ARFLCDRYYLASPELEVLQDGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVMENHGTAP 455
           AR LC+  Y  +P + +  +G  + R     ++P  L ++L EL KNAMRA ME+H   P
Sbjct: 238 ARRLCEHKYGNAPRVRI--NGHVAAR---FPFIPMPLDYILPELLKNAMRATMESHLDTP 292

Query: 456 ---PPIQVNLVNGKEDISVKI 509
              P + + + N   D+ ++I
Sbjct: 293 YNVPDVVITIANNDVDLIIRI 313



 Score = 33.9 bits (74), Expect = 0.54
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 31  ARAERVSRRDPGTENSIQYFLDRFYMSRISIRMLINQHTLL 153
           A   R SR+    E  ++YFLD+   SR+ IRML   H  L
Sbjct: 170 AEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 210


>AF026548-1|AAB82714.1|  412|Homo sapiens branched chain
           alpha-ketoacid dehydrogenase kinase precursor protein.
          Length = 412

 Score = 43.2 bits (97), Expect = 9e-04
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +3

Query: 276 ARFLCDRYYLASPELEVLQDGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVMENHGTAP 455
           AR LC+  Y  +P + +  +G  + R     ++P  L ++L EL KNAMRA ME+H   P
Sbjct: 238 ARRLCEHKYGNAPRVRI--NGHVAAR---FPFIPMPLDYILPELLKNAMRATMESHLDTP 292

Query: 456 ---PPIQVNLVNGKEDISVKI 509
              P + + + N   D+ ++I
Sbjct: 293 YNVPDVVITIANNDVDLIIRI 313



 Score = 33.9 bits (74), Expect = 0.54
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 31  ARAERVSRRDPGTENSIQYFLDRFYMSRISIRMLINQHTLL 153
           A   R SR+    E  ++YFLD+   SR+ IRML   H  L
Sbjct: 170 AEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 210


>BC009872-1|AAH09872.1|  335|Homo sapiens BCKDK protein protein.
          Length = 335

 Score = 33.9 bits (74), Expect = 0.54
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +1

Query: 31  ARAERVSRRDPGTENSIQYFLDRFYMSRISIRMLINQHTLL 153
           A   R SR+    E  ++YFLD+   SR+ IRML   H  L
Sbjct: 170 AEGLRESRKHIEDEKLVRYFLDKTLTSRLGIRMLATHHLAL 210


>AY273815-1|AAQ16156.1| 2623|Homo sapiens bone specific CMF608
           protein.
          Length = 2623

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +3

Query: 375 PSHLYHMLFELFKNAMRAVMENHGTAPPPIQVNLVN--GKEDISVKIL 512
           P H   +L +  KNAM    EN   +PPP+   L N  G+ED S  +L
Sbjct: 753 PQHWAALLEKAKKNAMPDKRENTTVSPPPVVTQLPNIPGEEDDSSGML 800


>BC101153-1|AAI01154.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 107 RWCRPDCRVEGTCLPPCCVVSCTPPTCC 134


>BC101152-1|AAI01153.1|  177|Homo sapiens KRTAP1-3 protein protein.
          Length = 177

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 117 RWCRPDCRVEGTCLPPCCVVSCTPPTCC 144


>BC101151-1|AAI01152.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 107 RWCRPDCRVEGTCLPPCCVVSCTPPTCC 134


>BC101150-1|AAI01151.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 107 RWCRPDCRVEGTCLPPCCVVSCTPPTCC 134


>BC069161-1|AAH69161.1|  167|Homo sapiens keratin associated protein
           1-3 protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 107 RWCRPDCRVEGTCLPPCCVVSCTPPTCC 134


>AL158013-1|CAH71494.1|  354|Homo sapiens NK2 transcription factor
           related, locus 4 (Drosophila) protein.
          Length = 354

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +3

Query: 267 YENARFLCDRYYLASPELEVLQDGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVMENHG 446
           YE  R    + YL++PE E L   +        ++  +H Y M  +    A + + +  G
Sbjct: 202 YELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGG 261

Query: 447 TAPPP 461
             PPP
Sbjct: 262 LGPPP 266


>AJ406927-1|CAC27566.1|  167|Homo sapiens keratin associated protein
           1.3 protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 107 RWCRPDCRVEGTCLPPCCVVSCTPPTCC 134


>AF202037-1|AAG35617.1|  289|Homo sapiens homeobox transcription
           factor protein.
          Length = 289

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 17/65 (26%), Positives = 28/65 (43%)
 Frame = +3

Query: 267 YENARFLCDRYYLASPELEVLQDGVSSLRPMPIVYVPSHLYHMLFELFKNAMRAVMENHG 446
           YE  R    + YL++PE E L   +        ++  +H Y M  +    A + + +  G
Sbjct: 202 YELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKAAQQLQQEGG 261

Query: 447 TAPPP 461
             PPP
Sbjct: 262 LGPPP 266


>AB081339-1|BAC15620.1|  141|Homo sapiens keratin associated protein
           1.9 protein.
          Length = 141

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 81  RWCRPDCRVEGTCLPPCCVVSCTPPTCC 108


>AB081338-1|BAC15619.1|  177|Homo sapiens keratin associated protein
           1.8 protein.
          Length = 177

 Score = 30.3 bits (65), Expect = 6.6
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 322 RYCRTECRVCARC--P*CMCPRTSTTCC 399
           R+CR +CRV   C  P C+   T  TCC
Sbjct: 117 RWCRPDCRVEGTCLPPCCVVSCTPPTCC 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,398,266
Number of Sequences: 237096
Number of extensions: 2526152
Number of successful extensions: 7115
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7050
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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