Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0223.Seq
         (801 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U60800-1|AAC50810.1|  862|Homo sapiens semaphorin protein.             33   0.91 
BC054500-1|AAH54500.1|  862|Homo sapiens sema domain, immunoglob...    33   0.91 
AL929575-4|CAI43250.2|  862|Homo sapiens sema domain, immunoglob...    33   0.91 
AL590233-3|CAI17379.2|  862|Homo sapiens sema domain, immunoglob...    33   0.91 
AB210030-1|BAE06112.1|  870|Homo sapiens SEMA4D variant protein ...    33   0.91 
BC025996-1|AAH25996.1|  141|Homo sapiens hypothetical LOC441046 ...    31   4.8  
BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix...    31   4.8  
AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein.               31   4.8  

>U60800-1|AAC50810.1|  862|Homo sapiens semaphorin protein.
          Length = 862

 Score = 33.5 bits (73), Expect = 0.91
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 655 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 575
           H+ +W VS+++KAKC +KG    TE LN
Sbjct: 83  HEVYWKVSEDKKAKCAEKGKSKQTECLN 110


>BC054500-1|AAH54500.1|  862|Homo sapiens sema domain,
           immunoglobulin domain (Ig), transmembrane domain (TM)
           and short cy protein.
          Length = 862

 Score = 33.5 bits (73), Expect = 0.91
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 655 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 575
           H+ +W VS+++KAKC +KG    TE LN
Sbjct: 83  HEVYWKVSEDKKAKCAEKGKSKQTECLN 110


>AL929575-4|CAI43250.2|  862|Homo sapiens sema domain,
           immunoglobulin domain (Ig), transmembrane domain (TM)
           and short cy protein.
          Length = 862

 Score = 33.5 bits (73), Expect = 0.91
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 655 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 575
           H+ +W VS+++KAKC +KG    TE LN
Sbjct: 83  HEVYWKVSEDKKAKCAEKGKSKQTECLN 110


>AL590233-3|CAI17379.2|  862|Homo sapiens sema domain,
           immunoglobulin domain (Ig), transmembrane domain (TM)
           and short cy protein.
          Length = 862

 Score = 33.5 bits (73), Expect = 0.91
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 655 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 575
           H+ +W VS+++KAKC +KG    TE LN
Sbjct: 83  HEVYWKVSEDKKAKCAEKGKSKQTECLN 110


>AB210030-1|BAE06112.1|  870|Homo sapiens SEMA4D variant protein
           protein.
          Length = 870

 Score = 33.5 bits (73), Expect = 0.91
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 655 HQRFW-VSKNRKAKCRKKGNKGDTEMLN 575
           H+ +W VS+++KAKC +KG    TE LN
Sbjct: 91  HEVYWKVSEDKKAKCAEKGKSKQTECLN 118


>BC025996-1|AAH25996.1|  141|Homo sapiens hypothetical LOC441046
           protein.
          Length = 141

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = +1

Query: 499 IQILSAHE-TITLINASIILKKEEYEYSTFPCRPYSLFCGILPSCFCSPRNAGESKRCSR 675
           ++I+SAH   I  +N    L   E+E ST P  P S+ C     C  +  +   S  CS 
Sbjct: 47  LRIVSAHSYAIVWVNGVDAL---EHEGSTSPLTPTSVACSRWGPCPPASASLSPSATCSS 103

Query: 676 SVGCTSGLHPNW 711
              C  G    W
Sbjct: 104 PPPCHQGASSTW 115


>BC023144-1|AAH23144.1| 1052|Homo sapiens SWI/SNF related, matrix
            associated, actin dependent regulator of chromatin, sub
            protein.
          Length = 1052

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 737  LKDLTAVEIQFGCNPLVHPTDLEHLLLSPAFLGEQKQEGKMP--QKRE 600
            LK  TA+E+Q  CN L+   + E++ L      E+K+ G  P  QKR+
Sbjct: 989  LKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSTQKRK 1036


>AB010882-1|BAA25173.1| 1052|Homo sapiens hSNF2H protein.
          Length = 1052

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -2

Query: 737  LKDLTAVEIQFGCNPLVHPTDLEHLLLSPAFLGEQKQEGKMP--QKRE 600
            LK  TA+E+Q  CN L+   + E++ L      E+K+ G  P  QKR+
Sbjct: 989  LKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSTQKRK 1036


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,704,458
Number of Sequences: 237096
Number of extensions: 2301577
Number of successful extensions: 8183
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8177
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)