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Last updated: 2022/09/19
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= psV30102.Seq
         (594 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC105292-1|AAI05293.1|  130|Homo sapiens ribosomal protein S15a ...   136   7e-32
BC105273-1|AAI05274.1|  130|Homo sapiens ribosomal protein S15a ...   136   7e-32
BC046113-1|AAH46113.1|  130|Homo sapiens ribosomal protein S15a ...   136   7e-32
BC030569-1|AAH30569.1|  130|Homo sapiens ribosomal protein S15a ...   136   7e-32
BC001697-1|AAH01697.1|  130|Homo sapiens ribosomal protein S15a ...   136   7e-32
AY208299-1|AAO48936.1|  130|Homo sapiens S15a protein.                136   7e-32
AB062400-1|BAB93487.1|  130|Homo sapiens OK/SW-cl.82 protein.         136   7e-32
X84407-1|CAA59127.1|  130|Homo sapiens ribosomal protein S15a pr...   134   2e-31
X62691-1|CAA44568.1|  129|Homo sapiens ribosomal protein homolog...   101   1e-21
BC071775-1|AAH71775.1|   37|Homo sapiens Unknown (protein for MG...    42   0.001
X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein.      30   7.1  
U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein.                   30   7.1  
DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette, s...    30   7.1  
AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein p...    30   7.1  
AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane ...    30   7.1  

>BC105292-1|AAI05293.1|  130|Homo sapiens ribosomal protein S15a
           protein.
          Length = 130

 Score =  136 bits (328), Expect = 7e-32
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>BC105273-1|AAI05274.1|  130|Homo sapiens ribosomal protein S15a
           protein.
          Length = 130

 Score =  136 bits (328), Expect = 7e-32
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>BC046113-1|AAH46113.1|  130|Homo sapiens ribosomal protein S15a
           protein.
          Length = 130

 Score =  136 bits (328), Expect = 7e-32
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>BC030569-1|AAH30569.1|  130|Homo sapiens ribosomal protein S15a
           protein.
          Length = 130

 Score =  136 bits (328), Expect = 7e-32
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>BC001697-1|AAH01697.1|  130|Homo sapiens ribosomal protein S15a
           protein.
          Length = 130

 Score =  136 bits (328), Expect = 7e-32
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 35/48 (72%), Positives = 40/48 (83%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPR DV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>AY208299-1|AAO48936.1|  130|Homo sapiens S15a protein.
          Length = 130

 Score =  136 bits (328), Expect = 7e-32
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>AB062400-1|BAB93487.1|  130|Homo sapiens OK/SW-cl.82 protein.
          Length = 130

 Score =  136 bits (328), Expect = 7e-32
 Identities = 64/69 (92%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>X84407-1|CAA59127.1|  130|Homo sapiens ribosomal protein S15a
           protein.
          Length = 130

 Score =  134 bits (325), Expect = 2e-31
 Identities = 63/69 (91%), Positives = 68/69 (98%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKRQVLIRPCSKVIV+FLT+MM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAGK 60

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 61  IVVNLTGRL 69



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 71  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 118


>X62691-1|CAA44568.1|  129|Homo sapiens ribosomal protein homologous
           to yeast  S24 protein.
          Length = 129

 Score =  101 bits (243), Expect = 1e-21
 Identities = 52/69 (75%), Positives = 57/69 (82%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKFLTVMMXHGYIGEFEIVDDHRAGK 284
           MVRMNVL+DALKSI+NAEKRGKR+ L+          LTVMM HGYIGEFEI+DDHRAGK
Sbjct: 1   MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAGK 59

Query: 283 IVVNLTGRL 257
           IVVNLTGRL
Sbjct: 60  IVVNLTGRL 68



 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 36/48 (75%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = -2

Query: 254 KCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLXTSGGIMXHEEARR 114
           KCGVISPRFDV + D+E+W  NLLPSRQFG++VL TS GIM HEEARR
Sbjct: 70  KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARR 117


>BC071775-1|AAH71775.1|   37|Homo sapiens Unknown (protein for
           MGC:88417) protein.
          Length = 37

 Score = 42.3 bits (95), Expect = 0.001
 Identities = 21/37 (56%), Positives = 26/37 (70%)
 Frame = -3

Query: 463 MVRMNVLSDALKSIHNAEKRGKRQVLIRPCSKVIVKF 353
           MV MNVL+ ALKSI+N + RGK QVL R C  ++  F
Sbjct: 1   MVHMNVLTIALKSINNVKTRGKHQVLRRLCPVLLSSF 37


>X97187-1|CAA65825.1| 1704|Homo sapiens ABC-C transporter protein.
          Length = 1704

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -3

Query: 331  GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
            GY  +F+ + DH  G+ ++ +  RL+ +   H+     +T+   GL+  PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507


>U78735-1|AAC50967.1| 1704|Homo sapiens ABC3 protein.
          Length = 1704

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -3

Query: 331  GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
            GY  +F+ + DH  G+ ++ +  RL+ +   H+     +T+   GL+  PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507


>DQ073080-1|AAY57325.1| 1704|Homo sapiens ATP-binding cassette,
            sub-family A (ABC1), member 3 protein.
          Length = 1704

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -3

Query: 331  GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
            GY  +F+ + DH  G+ ++ +  RL+ +   H+     +T+   GL+  PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507


>AB210044-1|BAE06126.1| 1708|Homo sapiens ABCA3 variant protein
            protein.
          Length = 1708

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -3

Query: 331  GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
            GY  +F+ + DH  G+ ++ +  RL+ +   H+     +T+   GL+  PH
Sbjct: 1463 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1511


>AB070929-1|BAB86781.1| 1704|Homo sapiens lamellar body membrane
            specific ATP-binding cassette protein protein.
          Length = 1704

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -3

Query: 331  GYIGEFEIVDDHRAGKIVVNLTGRLKSVVSFHLVLMFPSTILKDGLICSPH 179
            GY  +F+ + DH  G+ ++ +  RL+ +   H+     +T+   GL+  PH
Sbjct: 1459 GYCPQFDALLDHMTGREMLVMYARLRGIPERHIGACVENTL--RGLLLEPH 1507


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,040,364
Number of Sequences: 237096
Number of extensions: 1208923
Number of successful extensions: 1649
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1639
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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