Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0053.Seq
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39412-1|AAC80170.1|  295|Homo sapiens alpha SNAP protein.             30   8.3  
BT019568-1|AAV38375.1|  295|Homo sapiens N-ethylmaleimide-sensit...    30   8.3  
BC091511-1|AAH91511.1|  295|Homo sapiens N-ethylmaleimide-sensit...    30   8.3  
BC028234-1|AAH28234.1|  295|Homo sapiens N-ethylmaleimide-sensit...    30   8.3  
BC007432-1|AAH07432.1|  295|Homo sapiens N-ethylmaleimide-sensit...    30   8.3  
BC001165-1|AAH01165.1|  295|Homo sapiens N-ethylmaleimide-sensit...    30   8.3  
AK126519-1|BAC86576.1|  141|Homo sapiens (NAPA).  protein.             30   8.3  

>U39412-1|AAC80170.1|  295|Homo sapiens alpha SNAP protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 CI-VFNVKIL*PTFESLYPPVDSTRYCKYLQRLVRRHRWETDVPS 366
           CI + N K+    +E L+P    +R CK +++L+  H  E +V S
Sbjct: 215 CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHE-EQNVDS 258


>BT019568-1|AAV38375.1|  295|Homo sapiens N-ethylmaleimide-sensitive
           factor attachment protein, alpha protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 CI-VFNVKIL*PTFESLYPPVDSTRYCKYLQRLVRRHRWETDVPS 366
           CI + N K+    +E L+P    +R CK +++L+  H  E +V S
Sbjct: 215 CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHE-EQNVDS 258


>BC091511-1|AAH91511.1|  295|Homo sapiens N-ethylmaleimide-sensitive
           factor attachment protein, alpha protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 CI-VFNVKIL*PTFESLYPPVDSTRYCKYLQRLVRRHRWETDVPS 366
           CI + N K+    +E L+P    +R CK +++L+  H  E +V S
Sbjct: 215 CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHE-EQNVDS 258


>BC028234-1|AAH28234.1|  295|Homo sapiens N-ethylmaleimide-sensitive
           factor attachment protein, alpha protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 CI-VFNVKIL*PTFESLYPPVDSTRYCKYLQRLVRRHRWETDVPS 366
           CI + N K+    +E L+P    +R CK +++L+  H  E +V S
Sbjct: 215 CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHE-EQNVDS 258


>BC007432-1|AAH07432.1|  295|Homo sapiens N-ethylmaleimide-sensitive
           factor attachment protein, alpha protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 CI-VFNVKIL*PTFESLYPPVDSTRYCKYLQRLVRRHRWETDVPS 366
           CI + N K+    +E L+P    +R CK +++L+  H  E +V S
Sbjct: 215 CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHE-EQNVDS 258


>BC001165-1|AAH01165.1|  295|Homo sapiens N-ethylmaleimide-sensitive
           factor attachment protein, alpha protein.
          Length = 295

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 CI-VFNVKIL*PTFESLYPPVDSTRYCKYLQRLVRRHRWETDVPS 366
           CI + N K+    +E L+P    +R CK +++L+  H  E +V S
Sbjct: 215 CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHE-EQNVDS 258


>AK126519-1|BAC86576.1|  141|Homo sapiens (NAPA).  protein.
          Length = 141

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 235 CI-VFNVKIL*PTFESLYPPVDSTRYCKYLQRLVRRHRWETDVPS 366
           CI + N K+    +E L+P    +R CK +++L+  H  E +V S
Sbjct: 61  CIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHE-EQNVDS 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,519,703
Number of Sequences: 237096
Number of extensions: 1583080
Number of successful extensions: 3266
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3266
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)