Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV30067
(619 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for ... 226 4e-59
M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit... 226 4e-59
D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein. 226 4e-59
DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP synth... 226 4e-59
BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+ transp... 226 4e-59
M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein. 222 9e-58
X65460-1|CAA46452.1| 553|Homo sapiens ATP synthase alpha subuni... 64 5e-10
X59066-1|CAA41789.1| 553|Homo sapiens H(+)-transporting ATP sy... 64 5e-10
D28126-1|BAA05672.1| 553|Homo sapiens ATP synthase alpha subuni... 64 5e-10
D14710-1|BAA03531.1| 553|Homo sapiens ATP synthase alpha subuni... 64 5e-10
BT007209-1|AAP35873.1| 553|Homo sapiens ATP synthase, H+ transp... 64 5e-10
BC067385-1|AAH67385.1| 553|Homo sapiens ATP synthase, H+ transp... 64 5e-10
BC064562-1|AAH64562.1| 553|Homo sapiens ATP synthase, H+ transp... 64 5e-10
BC039135-1|AAH39135.2| 553|Homo sapiens ATP synthase, H+ transp... 64 5e-10
BC019310-1|AAH19310.1| 553|Homo sapiens ATP synthase, H+ transp... 64 5e-10
BC016046-1|AAH16046.1| 553|Homo sapiens ATP synthase, H+ transp... 64 5e-10
BC011384-1|AAH11384.1| 553|Homo sapiens ATP synthase, H+ transp... 64 5e-10
BC008028-1|AAH08028.2| 450|Homo sapiens ATP5A1 protein protein. 64 5e-10
BC007299-1|AAH07299.1| 408|Homo sapiens ATP5A1 protein protein. 49 2e-05
M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembr... 45 2e-04
BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting... 45 2e-04
BC035978-1|AAH35978.1| 260|Homo sapiens ATP6V1B1 protein protein. 45 2e-04
AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting... 45 2e-04
AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subuni... 45 2e-04
X62949-1|CAA44721.1| 511|Homo sapiens vacuolar isoform 2 of H+A... 41 0.003
L35249-1|AAA58661.1| 511|Homo sapiens vacuolar H+-ATPase 56,000... 41 0.003
BC007309-1|AAH07309.1| 501|Homo sapiens ATP6V1B2 protein protein. 41 0.003
BC003100-1|AAH03100.1| 511|Homo sapiens ATPase, H+ transporting... 41 0.003
AB208806-1|BAD92043.1| 319|Homo sapiens ATPase, H+ transporting... 41 0.003
BC030640-1|AAH30640.1| 511|Homo sapiens ATPase, H+ transporting... 41 0.004
M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein. 40 0.009
L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein. 33 0.81
BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting... 32 1.4
BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting... 32 1.4
AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform... 32 1.4
L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein. 32 1.9
X82676-1|CAA57993.1| 1187|Homo sapiens tyrosine phosphatase prot... 31 4.3
BC104803-1|AAI04804.1| 1187|Homo sapiens protein tyrosine phosph... 31 4.3
BC101754-1|AAI01755.1| 1187|Homo sapiens protein tyrosine phosph... 31 4.3
AL929236-1|CAH70919.1| 1187|Homo sapiens protein tyrosine phosph... 31 4.3
AL603838-1|CAH72982.1| 1187|Homo sapiens protein tyrosine phosph... 31 4.3
AL592216-1|CAH73479.1| 1187|Homo sapiens protein tyrosine phosph... 31 4.3
AL445305-1|CAH73027.1| 1187|Homo sapiens protein tyrosine phosph... 31 4.3
BC122556-1|AAI22557.1| 531|Homo sapiens UNC5A protein protein. 29 9.9
BC009333-1|AAH09333.2| 541|Homo sapiens UNC5A protein protein. 29 9.9
AB075856-1|BAB85562.1| 351|Homo sapiens KIAA1976 protein protein. 29 9.9
>X03559-1|CAA27246.1| 539|Homo sapiens protein ( Human mRNA for
F1-ATPase beta subunit (F-1 beta). ).
Length = 539
Score = 226 bits (553), Expect = 4e-59
Identities = 109/132 (82%), Positives = 121/132 (91%)
Frame = +3
Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
DVQF++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ VLDSG+P
Sbjct: 82 DVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAP 141
Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
I+IPVG ETLGRI+NVIGEPIDERGPI T + A IHAEAPEF++MSV+QEILVTGIKVVD
Sbjct: 142 IKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVD 201
Query: 573 LLAPYAKGERLG 608
LLAPYAKG ++G
Sbjct: 202 LLAPYAKGGKIG 213
>M27132-1|AAA51809.1| 529|Homo sapiens ATP synthase beta subunit
precursor protein.
Length = 529
Score = 226 bits (553), Expect = 4e-59
Identities = 109/132 (82%), Positives = 121/132 (91%)
Frame = +3
Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
DVQF++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ VLDSG+P
Sbjct: 72 DVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAP 131
Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
I+IPVG ETLGRI+NVIGEPIDERGPI T + A IHAEAPEF++MSV+QEILVTGIKVVD
Sbjct: 132 IKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVD 191
Query: 573 LLAPYAKGERLG 608
LLAPYAKG ++G
Sbjct: 192 LLAPYAKGGKIG 203
>D00022-1|BAA00016.1| 539|Homo sapiens F1 beta subunit protein.
Length = 539
Score = 226 bits (553), Expect = 4e-59
Identities = 109/132 (82%), Positives = 121/132 (91%)
Frame = +3
Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
DVQF++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ VLDSG+P
Sbjct: 82 DVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAP 141
Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
I+IPVG ETLGRI+NVIGEPIDERGPI T + A IHAEAPEF++MSV+QEILVTGIKVVD
Sbjct: 142 IKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVD 201
Query: 573 LLAPYAKGERLG 608
LLAPYAKG ++G
Sbjct: 202 LLAPYAKGGKIG 213
>DQ403107-1|ABD77240.1| 445|Homo sapiens mitochondrial ATP
synthase, H+ transporting F1 complex beta subunit
protein.
Length = 445
Score = 226 bits (553), Expect = 4e-59
Identities = 109/132 (82%), Positives = 121/132 (91%)
Frame = +3
Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
DVQF++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ VLDSG+P
Sbjct: 8 DVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAP 67
Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
I+IPVG ETLGRI+NVIGEPIDERGPI T + A IHAEAPEF++MSV+QEILVTGIKVVD
Sbjct: 68 IKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVD 127
Query: 573 LLAPYAKGERLG 608
LLAPYAKG ++G
Sbjct: 128 LLAPYAKGGKIG 139
>BC016512-1|AAH16512.1| 529|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, beta polypeptide
protein.
Length = 529
Score = 226 bits (553), Expect = 4e-59
Identities = 109/132 (82%), Positives = 121/132 (91%)
Frame = +3
Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
DVQF++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ VLDSG+P
Sbjct: 72 DVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAP 131
Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
I+IPVG ETLGRI+NVIGEPIDERGPI T + A IHAEAPEF++MSV+QEILVTGIKVVD
Sbjct: 132 IKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVD 191
Query: 573 LLAPYAKGERLG 608
LLAPYAKG ++G
Sbjct: 192 LLAPYAKGGKIG 203
>M19483-1|AAA51808.1| 529|Homo sapiens ATPSB protein.
Length = 529
Score = 222 bits (542), Expect = 9e-58
Identities = 107/132 (81%), Positives = 119/132 (90%)
Frame = +3
Query: 213 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 392
DVQF++ LPPILNALEVQ R RLVLEVAQHLGE+TVRTIAMDGTEGLVRGQ VLDSG
Sbjct: 72 DVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGDQ 131
Query: 393 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 572
++IPVG ETLGRI+NVIGEPIDERGPI T + A IHAEAPEF++MSV+QEILVTGIKVVD
Sbjct: 132 LKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVD 191
Query: 573 LLAPYAKGERLG 608
LLAPYAKG ++G
Sbjct: 192 LLAPYAKGGKIG 203
>X65460-1|CAA46452.1| 553|Homo sapiens ATP synthase alpha subunit
protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>X59066-1|CAA41789.1| 553|Homo sapiens H(+)-transporting ATP
synthase protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>D28126-1|BAA05672.1| 553|Homo sapiens ATP synthase alpha subunit
protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>D14710-1|BAA03531.1| 553|Homo sapiens ATP synthase alpha subunit
protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BT007209-1|AAP35873.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit,
isoform protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BC067385-1|AAH67385.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BC064562-1|AAH64562.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BC039135-1|AAH39135.2| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BC019310-1|AAH19310.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BC016046-1|AAH16046.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BC011384-1|AAH11384.1| 553|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, alpha subunit 1,
cardi protein.
Length = 553
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 116 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 175
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 176 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 207
>BC008028-1|AAH08028.2| 450|Homo sapiens ATP5A1 protein protein.
Length = 450
Score = 63.7 bits (148), Expect = 5e-10
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 330 IAMDGTEGLVR-GQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAE 506
+ + G + L++ G V +G+ + +PVG E LGR+++ +G ID +GPI + + +
Sbjct: 13 VVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLK 72
Query: 507 APEFVDMSVQQEILVTGIKVVDLLAPYAKGER 602
AP + +E + TGIK VD L P +G+R
Sbjct: 73 APGIIPRISVREPMQTGIKAVDSLVPIGRGQR 104
>BC007299-1|AAH07299.1| 408|Homo sapiens ATP5A1 protein protein.
Length = 408
Score = 48.8 bits (111), Expect = 2e-05
Identities = 22/61 (36%), Positives = 35/61 (57%)
Frame = +3
Query: 420 LGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGE 599
LGR+++ +G ID +GPI + + +AP + +E + TGIK VD L P +G+
Sbjct: 2 LGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGIIPRISVREPMQTGIKAVDSLVPIGRGQ 61
Query: 600 R 602
R
Sbjct: 62 R 62
>M25809-1|AAA36498.1| 511|Homo sapiens protein ( Human endomembrane
proton pump subunit mRNA, complete cds. ).
Length = 511
Score = 44.8 bits (101), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEVA G + + +GT G+ + + +G +R PV + LGR+ N G+PID+
Sbjct: 78 VLEVA---GTKAIVQV-FEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 133
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGERL 605
+ + I+ + +E++ TGI +D++ A+G+++
Sbjct: 134 GPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKI 181
>BC063411-1|AAH63411.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B1 (Renal tubular acido
protein.
Length = 513
Score = 44.8 bits (101), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEVA G + + +GT G+ + + +G +R PV + LGR+ N G+PID+
Sbjct: 80 VLEVA---GTKAIVQV-FEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 135
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGERL 605
+ + I+ + +E++ TGI +D++ A+G+++
Sbjct: 136 GPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKI 183
>BC035978-1|AAH35978.1| 260|Homo sapiens ATP6V1B1 protein protein.
Length = 260
Score = 44.8 bits (101), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEVA G + + +GT G+ + + +G +R PV + LGR+ N G+PID+
Sbjct: 78 VLEVA---GTKAIVQV-FEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 133
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGERL 605
+ + I+ + +E++ TGI +D++ A+G+++
Sbjct: 134 GPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKI 181
>AK223151-1|BAD96871.1| 513|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kD, V1 subunit B, isoform 1 variant
protein.
Length = 513
Score = 44.8 bits (101), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEVA G + + +GT G+ + + +G +R PV + LGR+ N G+PID+
Sbjct: 80 VLEVA---GTKAIVQV-FEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 135
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGERL 605
+ + I+ + +E++ TGI +D++ A+G+++
Sbjct: 136 GPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKI 183
>AF107478-1|AAD11943.1| 426|Homo sapiens H+-ATPase beta 1 subunit
protein.
Length = 426
Score = 44.8 bits (101), Expect = 2e-04
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEVA G + + +GT G+ + + +G +R PV + LGR+ N G+PID+
Sbjct: 44 VLEVA---GTKAIVQV-FEGTSGIDARKTTCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 99
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAPYAKGERL 605
+ + I+ + +E++ TGI +D++ A+G+++
Sbjct: 100 GPVVMAEDFLDINGQPINPHSRIYPEEMIQTGISPIDVMNSIARGQKI 147
>X62949-1|CAA44721.1| 511|Homo sapiens vacuolar isoform 2 of
H+ATPase Mr 56,000 subunit protein.
Length = 511
Score = 41.1 bits (92), Expect = 0.003
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEV+ G V + +GT G+ + + +G +R PV + LGR+ N G+PID
Sbjct: 86 VLEVS---GSKAVVQV-FEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID- 140
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSV-QQEILVTGIKVVDLLAPYAKGERL 605
RGP+ + P + +E++ TGI +D + A+G+++
Sbjct: 141 RGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKI 189
>L35249-1|AAA58661.1| 511|Homo sapiens vacuolar H+-ATPase 56,000
subunit protein.
Length = 511
Score = 41.1 bits (92), Expect = 0.003
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEV+ G V + +GT G+ + + +G +R PV + LGR+ N G+PID
Sbjct: 86 VLEVS---GSKAVVQV-FEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID- 140
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSV-QQEILVTGIKVVDLLAPYAKGERL 605
RGP+ + P + +E++ TGI +D + A+G+++
Sbjct: 141 RGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKI 189
>BC007309-1|AAH07309.1| 501|Homo sapiens ATP6V1B2 protein protein.
Length = 501
Score = 41.1 bits (92), Expect = 0.003
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEV+ G V + +GT G+ + + +G +R PV + LGR+ N G+PID
Sbjct: 76 VLEVS---GSKAVVQV-FEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID- 130
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSV-QQEILVTGIKVVDLLAPYAKGERL 605
RGP+ + P + +E++ TGI +D + A+G+++
Sbjct: 131 RGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKI 179
>BC003100-1|AAH03100.1| 511|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B2 protein.
Length = 511
Score = 41.1 bits (92), Expect = 0.003
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEV+ G V + +GT G+ + + +G +R PV + LGR+ N G+PID
Sbjct: 86 VLEVS---GSKAVVQV-FEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID- 140
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSV-QQEILVTGIKVVDLLAPYAKGERL 605
RGP+ + P + +E++ TGI +D + A+G+++
Sbjct: 141 RGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKI 189
>AB208806-1|BAD92043.1| 319|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kD, V1 subunit B, isoform 2 variant
protein.
Length = 319
Score = 41.1 bits (92), Expect = 0.003
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEV+ G V + +GT G+ + + +G +R PV + LGR+ N G+PID
Sbjct: 87 VLEVS---GSKAVVQV-FEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID- 141
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSV-QQEILVTGIKVVDLLAPYAKGERL 605
RGP+ + P + +E++ TGI +D + A+G+++
Sbjct: 142 RGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQKI 190
>BC030640-1|AAH30640.1| 511|Homo sapiens ATPase, H+ transporting,
lysosomal 56/58kDa, V1 subunit B2 protein.
Length = 511
Score = 40.7 bits (91), Expect = 0.004
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = +3
Query: 285 VLEVAQHLGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDE 461
VLEV+ G V + +GT G+ + + +G +R PV + LGR+ N G+PID
Sbjct: 86 VLEVS---GSKAVVQV-FEGTSGIDAKKTSCEFTGDILRTPVSEDMLGRVFNGSGKPID- 140
Query: 462 RGPIPTDKTAAIHAEAPEFVDMSV-QQEILVTGIKVVDLLAPYAKGERL 605
RGP+ + P + +E++ TGI +D + A+G+++
Sbjct: 141 RGPVVLAEDFLDIMGQPINPQCRIYPEEMIRTGISAIDGMNSIARGQKI 189
>M60346-1|AAA35610.1| 406|Homo sapiens H+-ATPase B subunit protein.
Length = 406
Score = 39.5 bits (88), Expect = 0.009
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 381 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSV-QQEILVTG 557
+G +R PV + LGR+ N G+PID RGP+ + P + +E++ TG
Sbjct: 10 TGDILRTPVSEDMLGRVFNGSGKPID-RGPVVLAEDFLDIMGQPINPQCRIYPEEMIQTG 68
Query: 558 IKVVDLLAPYAKGERL 605
I +D + A+G+++
Sbjct: 69 ISAIDGMNSIARGQKI 84
>L09234-1|AAA35578.1| 615|Homo sapiens ATPase protein.
Length = 615
Score = 33.1 bits (72), Expect = 0.81
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 312 ENTVRTIAM-DGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 461
E + TI + + T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 57 EGDMATIQVYEDTSGVTVGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 107
>BT006672-1|AAP35318.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A, isoform 1 protein.
Length = 617
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 312 ENTVRTIAM-DGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 461
E + TI + + T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 58 EGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSD 108
>BC013138-1|AAH13138.1| 617|Homo sapiens ATPase, H+ transporting,
lysosomal 70kDa, V1 subunit A protein.
Length = 617
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 312 ENTVRTIAM-DGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 461
E + TI + + T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 58 EGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSD 108
>AF113129-1|AAF14870.1| 617|Homo sapiens vacuolar ATPase isoform
VA68 protein.
Length = 617
Score = 32.3 bits (70), Expect = 1.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 312 ENTVRTIAM-DGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 461
E + TI + + T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 58 EGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSD 108
>L09235-1|AAA83249.1| 617|Homo sapiens ATPase protein.
Length = 617
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 312 ENTVRTIAM-DGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 461
E + TI + + T G+ G PVL +G P+ + VG +G I + I P+ +
Sbjct: 58 EGDMATIQVYEETCGVSVGDPVLRTGKPLSVDVGPGIMGAIFDGIQRPLSD 108
>X82676-1|CAA57993.1| 1187|Homo sapiens tyrosine phosphatase
protein.
Length = 1187
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 315 NTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGP----IPT- 479
N + T A + E LV QP + P +P G + G N + P D+R P +P+
Sbjct: 470 NIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQ--GVYSNKLVSPSDQRNPKNNVVPSK 527
Query: 480 -DKTAAIH-AEAPEFVDMSVQ 536
+A H PE +M +Q
Sbjct: 528 PGASAISHTVSTPELANMQLQ 548
>BC104803-1|AAI04804.1| 1187|Homo sapiens protein tyrosine
phosphatase, non-receptor type 14 protein.
Length = 1187
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 315 NTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGP----IPT- 479
N + T A + E LV QP + P +P G + G N + P D+R P +P+
Sbjct: 470 NIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQ--GVYSNKLVSPSDQRNPKNNVVPSK 527
Query: 480 -DKTAAIH-AEAPEFVDMSVQ 536
+A H PE +M +Q
Sbjct: 528 PGASAISHTVSTPELANMQLQ 548
>BC101754-1|AAI01755.1| 1187|Homo sapiens protein tyrosine
phosphatase, non-receptor type 14 protein.
Length = 1187
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 315 NTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGP----IPT- 479
N + T A + E LV QP + P +P G + G N + P D+R P +P+
Sbjct: 470 NIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQ--GVYSNKLVSPSDQRNPKNNVVPSK 527
Query: 480 -DKTAAIH-AEAPEFVDMSVQ 536
+A H PE +M +Q
Sbjct: 528 PGASAISHTVSTPELANMQLQ 548
>AL929236-1|CAH70919.1| 1187|Homo sapiens protein tyrosine
phosphatase, non-receptor type 14 protein.
Length = 1187
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 315 NTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGP----IPT- 479
N + T A + E LV QP + P +P G + G N + P D+R P +P+
Sbjct: 470 NIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQ--GVYSNKLVSPSDQRNPKNNVVPSK 527
Query: 480 -DKTAAIH-AEAPEFVDMSVQ 536
+A H PE +M +Q
Sbjct: 528 PGASAISHTVSTPELANMQLQ 548
>AL603838-1|CAH72982.1| 1187|Homo sapiens protein tyrosine
phosphatase, non-receptor type 14 protein.
Length = 1187
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 315 NTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGP----IPT- 479
N + T A + E LV QP + P +P G + G N + P D+R P +P+
Sbjct: 470 NIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQ--GVYSNKLVSPSDQRNPKNNVVPSK 527
Query: 480 -DKTAAIH-AEAPEFVDMSVQ 536
+A H PE +M +Q
Sbjct: 528 PGASAISHTVSTPELANMQLQ 548
>AL592216-1|CAH73479.1| 1187|Homo sapiens protein tyrosine
phosphatase, non-receptor type 14 protein.
Length = 1187
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 315 NTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGP----IPT- 479
N + T A + E LV QP + P +P G + G N + P D+R P +P+
Sbjct: 470 NIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQ--GVYSNKLVSPSDQRNPKNNVVPSK 527
Query: 480 -DKTAAIH-AEAPEFVDMSVQ 536
+A H PE +M +Q
Sbjct: 528 PGASAISHTVSTPELANMQLQ 548
>AL445305-1|CAH73027.1| 1187|Homo sapiens protein tyrosine
phosphatase, non-receptor type 14 protein.
Length = 1187
Score = 30.7 bits (66), Expect = 4.3
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +3
Query: 315 NTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGP----IPT- 479
N + T A + E LV QP + P +P G + G N + P D+R P +P+
Sbjct: 470 NIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQ--GVYSNKLVSPSDQRNPKNNVVPSK 527
Query: 480 -DKTAAIH-AEAPEFVDMSVQ 536
+A H PE +M +Q
Sbjct: 528 PGASAISHTVSTPELANMQLQ 548
>BC122556-1|AAI22557.1| 531|Homo sapiens UNC5A protein protein.
Length = 531
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 117 FFHILKGISQQLI*RLKCRFQLDLLPPTFSEISCSVW 7
F+HI G + L C F L+ + P+ S+++C +W
Sbjct: 366 FYHIWNGTQRYL----HCTFTLERVSPSTSDLACKLW 398
>BC009333-1|AAH09333.2| 541|Homo sapiens UNC5A protein protein.
Length = 541
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 117 FFHILKGISQQLI*RLKCRFQLDLLPPTFSEISCSVW 7
F+HI G + L C F L+ + P+ S+++C +W
Sbjct: 376 FYHIWNGTQRYL----HCTFTLERVSPSTSDLACKLW 408
>AB075856-1|BAB85562.1| 351|Homo sapiens KIAA1976 protein protein.
Length = 351
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 117 FFHILKGISQQLI*RLKCRFQLDLLPPTFSEISCSVW 7
F+HI G + L C F L+ + P+ S+++C +W
Sbjct: 87 FYHIWNGTQRYL----HCTFTLERVSPSTSDLACKLW 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,506,962
Number of Sequences: 237096
Number of extensions: 2096246
Number of successful extensions: 4707
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 4525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4695
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -