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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV30065
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein pr...    35   0.32 
AK223042-1|BAD96762.1|  433|Homo sapiens eukaryotic translation ...    34   0.56 
Z34278-1|CAA84032.1|  279|Homo sapiens mucin protein.                  33   0.74 
X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest...    33   0.98 
X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest...    33   0.98 
BC034980-1|AAH34980.1|  603|Homo sapiens Unknown (protein for IM...    33   0.98 
AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family...    33   0.98 
AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated ant...    33   0.98 
AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen C...    33   0.98 
AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-1...    32   1.7  
Z34282-1|CAA84036.1|   98|Homo sapiens mucin protein.                  31   3.0  
Z34276-1|CAA84030.1|   94|Homo sapiens mucin protein.                  31   3.0  
BC018708-1|AAH18708.1|  434|Homo sapiens zinc finger CCCH-type c...    31   4.0  
AK027357-1|BAB55059.1|  434|Homo sapiens protein ( Homo sapiens ...    31   4.0  
U31659-1|AAA84390.1|  677|Homo sapiens TAFII80 protein.                31   5.2  
L25444-1|AAA63643.1|  677|Homo sapiens TAFII70 protein.                31   5.2  
BC018115-1|AAH18115.1|  677|Homo sapiens TAF6 RNA polymerase II,...    31   5.2  
AY149894-1|AAN10295.1|  677|Homo sapiens TAF6 RNA polymerase II,...    31   5.2  
L12141-1|AAA58477.1|  347|Homo sapiens fork head-related protein...    30   6.9  
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating...    30   9.1  
BC109300-1|AAI09301.1|  784|Homo sapiens Sp4 transcription facto...    30   9.1  
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.       30   9.1  
AK131434-1|BAD18580.1|  933|Homo sapiens protein ( Homo sapiens ...    30   9.1  

>AL133561-1|CAB63715.1|  580|Homo sapiens hypothetical protein
           protein.
          Length = 580

 Score = 34.7 bits (76), Expect = 0.32
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
 Frame = +3

Query: 156 SHVHGTTSMTPTKASPSSTFKRS*RT-WPARATMQVKHQRWPK--PPELSPIYLPVSPVM 326
           SH   + + TP +ASP+    R+  T  P R +++  H+  P   PP  SP   P     
Sbjct: 206 SH-RASPTRTPPRASPTRRPPRASPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASP 264

Query: 327 PVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT 437
              P  +  +T   + P T P +   + PS  +  +T
Sbjct: 265 TGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTRT 301


>AK223042-1|BAD96762.1|  433|Homo sapiens eukaryotic translation
           elongation factor 1 alpha 1 variant protein.
          Length = 433

 Score = 33.9 bits (74), Expect = 0.56
 Identities = 24/69 (34%), Positives = 32/69 (46%)
 Frame = +2

Query: 302 LSAGIPGDACAAANVINSYTDGVRSGNFAGFRQSLGPFFGHVGQNLNLINQLVTNPGQLR 481
           LS  +PGD     NV N     VR GN AG  ++  P     G    +I  ++ +PGQ+ 
Sbjct: 270 LSEALPGDN-VGFNVKNVSVKDVRRGNVAGDSKNDPPMEA-AGFTAQVI--ILNHPGQIS 325

Query: 482 YSVGPALGC 508
               P LGC
Sbjct: 326 AGYAPVLGC 334


>Z34278-1|CAA84032.1|  279|Homo sapiens mucin protein.
          Length = 279

 Score = 33.5 bits (73), Expect = 0.74
 Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 4/129 (3%)
 Frame = +3

Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 347
           GTT       S +S    S  + P  +T           PE +P     SPV P    TS
Sbjct: 157 GTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 210

Query: 348 LTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPWVVPE 515
            + T T SGP T+P+    +  +SVP++ T   +   + ++S T   S      P  VP 
Sbjct: 211 ASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSGP-GTTPSPVPT 269

Query: 516 VEESMTSKP 542
              S TS P
Sbjct: 270 T--STTSAP 276


>X74874-1|CAA52862.1| 1970|Homo sapiens RNA polymerase II largest
            subunit protein.
          Length = 1970

 Score = 33.1 bits (72), Expect = 0.98
 Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
 Frame = +3

Query: 63   QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 242
            Q+PT     PS +     +  T         S+   +   TPT    S T  +   T P 
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873

Query: 243  RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 407
             + T        PK    SP Y P SPV  P  P  S T  T + + P+ SP S   S  
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933

Query: 408  VPSSDTWDKT 437
             P   T+  T
Sbjct: 1934 SPKGSTYSPT 1943


>X63564-1|CAA45125.1| 1970|Homo sapiens RNA polymerase II largest
            subunit protein.
          Length = 1970

 Score = 33.1 bits (72), Expect = 0.98
 Identities = 37/130 (28%), Positives = 48/130 (36%), Gaps = 5/130 (3%)
 Frame = +3

Query: 63   QAPTLHHR*PSINTVIMKFHATLMMEKLVP*SHVHGTTSMTPTKASPSSTFKRS*RTWPA 242
            Q+PT     PS +     +  T         S+   +   TPT    S T  +   T P 
Sbjct: 1814 QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPK 1873

Query: 243  RA-TMQVKHQRWPKPPELSPIYLPVSPV-MPVQPLTSLTL-TQTASGPETSPASDNLS-- 407
             + T        PK    SP Y P SPV  P  P  S T  T + + P+ SP S   S  
Sbjct: 1874 YSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPT 1933

Query: 408  VPSSDTWDKT 437
             P   T+  T
Sbjct: 1934 SPKGSTYSPT 1943


>BC034980-1|AAH34980.1|  603|Homo sapiens Unknown (protein for
           IMAGE:4824581) protein.
          Length = 603

 Score = 33.1 bits (72), Expect = 0.98
 Identities = 22/105 (20%), Positives = 48/105 (45%)
 Frame = +3

Query: 171 TTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSL 350
           T+   PT +SP  + K S    P+ ++M     + P   + +    P   ++P +P TS 
Sbjct: 2   TSPFAPTMSSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSR 61

Query: 351 TLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDT 485
               + S  +++ ++     PS+    ++ + S   + + V++DT
Sbjct: 62  NSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDT 106


>AL022152-2|CAD27434.1| 1142|Homo sapiens melanoma antigen family C, 1
            protein.
          Length = 1142

 Score = 33.1 bits (72), Expect = 0.98
 Identities = 33/114 (28%), Positives = 46/114 (40%)
 Frame = +3

Query: 291  LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470
            LSP+ +P SP+     L+SL   Q  S PE   +   L  P      +    S+ S +++
Sbjct: 689  LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746

Query: 471  VNSDTLSDQPWVVPEVEESMTSKPLGMQS*PAVTLVS*MKEYCIVKRLYNSRNS 632
             +S T    P   P   ES  S P G    P    VS    Y +   L +S  S
Sbjct: 747  CSSSTSLSLPQSFP---ESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHES 797


>AF064589-1|AAC18837.1| 1142|Homo sapiens melanoma-associated antigen
            protein.
          Length = 1142

 Score = 33.1 bits (72), Expect = 0.98
 Identities = 33/114 (28%), Positives = 46/114 (40%)
 Frame = +3

Query: 291  LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470
            LSP+ +P SP+     L+SL   Q  S PE   +   L  P      +    S+ S +++
Sbjct: 689  LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746

Query: 471  VNSDTLSDQPWVVPEVEESMTSKPLGMQS*PAVTLVS*MKEYCIVKRLYNSRNS 632
             +S T    P   P   ES  S P G    P    VS    Y +   L +S  S
Sbjct: 747  CSSSTSLSLPQSFP---ESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHES 797


>AF056334-1|AAC24227.1| 1142|Homo sapiens cancer/testis antigen CT7
            protein.
          Length = 1142

 Score = 33.1 bits (72), Expect = 0.98
 Identities = 33/114 (28%), Positives = 46/114 (40%)
 Frame = +3

Query: 291  LSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTL 470
            LSP+ +P SP+     L+SL   Q  S PE   +   L  P      +    S+ S +++
Sbjct: 689  LSPLQIPQSPLEGEDSLSSLHFPQ--SPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVSI 746

Query: 471  VNSDTLSDQPWVVPEVEESMTSKPLGMQS*PAVTLVS*MKEYCIVKRLYNSRNS 632
             +S T    P   P   ES  S P G    P    VS    Y +   L +S  S
Sbjct: 747  CSSSTSLSLPQSFP---ESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHES 797


>AF144094-1|AAF05903.1| 3530|Homo sapiens unconventional myosin-15
            protein.
          Length = 3530

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 276  PKPPELSPIYLPVSPVMPVQPLTSLTLTQTASGPETSPASDNL 404
            PKP  L+P  L  +P +P++P+ +  L Q  + PET+  S  L
Sbjct: 2518 PKP--LAPAPLAKAPRLPIKPVAAPVLAQDQASPETTSPSPEL 2558


>Z34282-1|CAA84036.1|   98|Homo sapiens mucin protein.
          Length = 98

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
 Frame = +3

Query: 168 GTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTS 347
           GTT       S +S    S  + P  +T           PE +P     SPV P    TS
Sbjct: 3   GTTPSAVPTTSITSAPTTSTNSAPISSTTSATTTSRISGPETTP-----SPV-PTASTTS 56

Query: 348 LTLTQTASGPETSPA----SDNLSVPSSDT 425
            + T T SGP T+P+    +  +SVP++ T
Sbjct: 57  ASTTSTTSGPGTTPSPVPTTSTISVPTTST 86


>Z34276-1|CAA84030.1|   94|Homo sapiens mucin protein.
          Length = 94

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
 Frame = +3

Query: 315 SPVMPVQPLTSLTLTQTASGPETSPA----SDNLSVPSSDTWDKT*ILSINSSLTLVNSD 482
           SPV P    TS + T T SGP T+P+    +  +SVP++ T   +   + ++S T   S 
Sbjct: 5   SPV-PTASTTSASTTSTTSGPGTTPSPVPTTSTISVPTTSTTSASTTSTTSASTTSTTSG 63

Query: 483 TLSDQPWVVPEVEESMTSKP 542
                P  VP    S TS P
Sbjct: 64  P-GTTPSPVPTT--STTSAP 80


>BC018708-1|AAH18708.1|  434|Homo sapiens zinc finger CCCH-type
           containing 10 protein.
          Length = 434

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = +3

Query: 276 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 410
           P P  ++P+ + V+PV PV     QPL  +T++ T +   T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429


>AK027357-1|BAB55059.1|  434|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14451 fis, clone HEMBB1001834. ).
          Length = 434

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = +3

Query: 276 PKPPELSPIYLPVSPVMPV-----QPLTSLTLTQTASGPETSP-ASDNLSV 410
           P P  ++P+ + V+PV PV     QPL  +T++ T +   T P AS ++ +
Sbjct: 379 PPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTYPIASQSMRI 429


>U31659-1|AAA84390.1|  677|Homo sapiens TAFII80 protein.
          Length = 677

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +3

Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
           V    +  P  + P + F     +  A +T QV       P   S    PV+  +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580

Query: 339 LTSLTLTQTASGPETSPA 392
           +  L  T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598


>L25444-1|AAA63643.1|  677|Homo sapiens TAFII70 protein.
          Length = 677

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +3

Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
           V    +  P  + P + F     +  A +T QV       P   S    PV+  +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580

Query: 339 LTSLTLTQTASGPETSPA 392
           +  L  T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598


>BC018115-1|AAH18115.1|  677|Homo sapiens TAF6 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 80kDa
           protein.
          Length = 677

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +3

Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
           V    +  P  + P + F     +  A +T QV       P   S    PV+  +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580

Query: 339 LTSLTLTQTASGPETSPA 392
           +  L  T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598


>AY149894-1|AAN10295.1|  677|Homo sapiens TAF6 RNA polymerase II,
           TATA box binding protein (TBP)-associated factor, 80kDa
           protein.
          Length = 677

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +3

Query: 162 VHGTTSMTPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMP-VQP 338
           V    +  P  + P + F     +  A +T QV       P   S    PV+  +P VQP
Sbjct: 521 VSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQP 580

Query: 339 LTSLTLTQTASGPETSPA 392
           +  L  T T + P T+P+
Sbjct: 581 IVKLVSTATTAPPSTAPS 598


>L12141-1|AAA58477.1|  347|Homo sapiens fork head-related protein
           protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 273 WPKPPELSPIYLPVSPVMPVQPLTS-LTLTQTASG-PETSPASDNLSVP 413
           W   PE   +Y PV+PV  + PL S +TL   +S  P   PAS   S P
Sbjct: 15  WSYYPEAGEVYSPVTPVPTMAPLNSYMTLNPLSSPYPGGLPASPLPSGP 63


>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
            factor protein.
          Length = 1404

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
 Frame = +3

Query: 183  TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362
            TPT     +T  +S    P  +T ++  +  PK  E SP   P  P       T   +T 
Sbjct: 859  TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 913

Query: 363  TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
            TA            PET+ A+  ++  ++ T +KT    I ++ T V S T  D
Sbjct: 914  TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 967


>BC109300-1|AAI09301.1|  784|Homo sapiens Sp4 transcription factor
           protein.
          Length = 784

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 26/78 (33%), Positives = 36/78 (46%)
 Frame = +3

Query: 324 MPVQPLTSLTLTQTASGPETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSDQPW 503
           MP  P +S T T TAS   TS  S +  V S+DT       + +S  T+  S T +    
Sbjct: 314 MPESPSSSTTCTTTAS---TSLTSSDTLVSSADTGQYASTSASSSERTIEESQTPAA--- 367

Query: 504 VVPEVEESMTSKPLGMQS 557
              E + S   +P GMQ+
Sbjct: 368 TESEAQSSSQLQPNGMQN 385


>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
          Length = 1404

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
 Frame = +3

Query: 183  TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362
            TPT     +T  +S    P  +T ++  +  PK  E SP   P  P       T   +T 
Sbjct: 859  TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 913

Query: 363  TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
            TA            PET+ A+  ++  ++ T +KT    I ++ T V S T  D
Sbjct: 914  TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 967


>AK131434-1|BAD18580.1|  933|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16561 fis, clone SYNOV4003981, moderately
           similar to Homo sapiens proteoglycan 4, (megakaryocyte
           stimulating ).
          Length = 933

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
 Frame = +3

Query: 183 TPTKASPSSTFKRS*RTWPARATMQVKHQRWPKPPELSPIYLPVSPVMPVQPLTSLTLTQ 362
           TPT     +T  +S    P  +T ++  +  PK  E SP   P  P       T   +T 
Sbjct: 388 TPTTTKEPTTIHKS----PDESTPELSAEPTPKALENSPKE-PGVPTTKTPAATKPEMTT 442

Query: 363 TASG----------PETSPASDNLSVPSSDTWDKT*ILSINSSLTLVNSDTLSD 494
           TA            PET+ A+  ++  ++ T +KT    I ++ T V S T  D
Sbjct: 443 TAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQD 496


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,435,619
Number of Sequences: 237096
Number of extensions: 2228817
Number of successful extensions: 6774
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6761
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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