Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS30103
(480 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069231-1|AAH69231.1| 427|Homo sapiens septin 6 protein. 30 4.8
Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated microtub... 29 6.4
D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein. 29 6.4
BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein pr... 29 6.4
BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein. 29 6.4
BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein. 29 6.4
AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein. 29 6.4
AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein. 29 6.4
AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein. 29 6.4
AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein. 29 6.4
X63187-1|CAA44869.1| 125|Homo sapiens HE4 protein protein. 29 8.5
BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ... 29 8.5
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ... 29 8.5
BC016881-1|AAH16881.1| 638|Homo sapiens Unknown (protein for IM... 29 8.5
AK055435-1|BAB70922.1| 634|Homo sapiens protein ( Homo sapiens ... 29 8.5
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein. 29 8.5
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein. 29 8.5
>BC069231-1|AAH69231.1| 427|Homo sapiens septin 6 protein.
Length = 427
Score = 29.9 bits (64), Expect = 4.8
Identities = 19/75 (25%), Positives = 36/75 (48%)
Frame = +3
Query: 30 AKMNFVSVALLIATVVMASSAETDTPRHYDLNQAKELFEIFVKEHNREYKDDADRELHYQ 209
A +FV + ++ V M E RHY+L + +L E+ K+ + + K + +E H
Sbjct: 267 AHCDFVKLREMLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETHEA 326
Query: 210 SFKKHLAEINQLNEK 254
+ L E+ + E+
Sbjct: 327 KRNEFLGELQKKEEE 341
>Y12490-1|CAA73095.1| 1979|Homo sapiens Golgi-associated
microtubule-binding protein protein.
Length = 1979
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 135 ELFEIFVKEHNREYKDDA--DRELHYQSFKKHLAEINQLNE 251
EL + ++ N +KD +RE ++ K++L+E+ QLNE
Sbjct: 626 ELMQSLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNE 666
>D63481-1|BAA09768.3| 1630|Homo sapiens KIAA0147 protein protein.
Length = 1630
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 194 RAALSIIQETLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q + R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>BX641024-1|CAE46015.1| 1694|Homo sapiens hypothetical protein
protein.
Length = 1694
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 135 ELFEIFVKEHNREYKDDA--DRELHYQSFKKHLAEINQLNE 251
EL + ++ N +KD +RE ++ K++L+E+ QLNE
Sbjct: 341 ELMQSLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNE 381
>BC044627-1|AAH44627.1| 682|Homo sapiens SCRIB protein protein.
Length = 682
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 194 RAALSIIQETLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q + R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 97 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 143
>BC014632-1|AAH14632.2| 832|Homo sapiens SCRIB protein protein.
Length = 832
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 194 RAALSIIQETLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q + R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 3 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 49
>AY062238-1|AAL38976.1| 1630|Homo sapiens scribble protein.
Length = 1630
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 194 RAALSIIQETLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q + R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>AF271734-1|AAP88018.1| 1601|Homo sapiens SCRIB1 variant N1 protein.
Length = 1601
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 194 RAALSIIQETLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q + R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 772 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 818
>AF240677-1|AAP88017.1| 1630|Homo sapiens CRIB1 protein.
Length = 1630
Score = 29.5 bits (63), Expect = 6.4
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 194 RAALSIIQETLGRDKPIEREDPYTTFGINKFADYTPEEQQSRLGLRLP 337
R A + +Q + R++ +E E+ T + DY+P E++ GLRLP
Sbjct: 801 RGAGTAVQMRVWRERMVEPENAVTITPLRPEDDYSPRERRGG-GLRLP 847
>AF007217-1|AAD09135.1| 1978|Homo sapiens Trip230 protein.
Length = 1978
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +3
Query: 135 ELFEIFVKEHNREYKDDA--DRELHYQSFKKHLAEINQLNE 251
EL + ++ N +KD +RE ++ K++L+E+ QLNE
Sbjct: 626 ELMQSLNQDSNSNFKDTLLKEREAEVRNLKQNLSELEQLNE 666
>X63187-1|CAA44869.1| 125|Homo sapiens HE4 protein protein.
Length = 125
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 321 NLLCCSSGV*SANLLMPNVVYGSSRSIGLSLPSV 220
NL CCS+G + LL PN GS + ++ P +
Sbjct: 58 NLKCCSAGCATFCLLCPNDKEGSCPQVNINFPQL 91
>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 EIFVKEHNREYKDDADRELHYQSFKKHLAEINQ 242
E+ VK H RE+++ D E+ + K+ L +I Q
Sbjct: 283 EVNVKSHQREHQNIQDLEIENEDLKERLRKIQQ 315
>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
coiled-coil domains and ankyrin repeats protein.
Length = 1416
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 EIFVKEHNREYKDDADRELHYQSFKKHLAEINQ 242
E+ VK H RE+++ D E+ + K+ L +I Q
Sbjct: 283 EVNVKSHQREHQNIQDLEIENEDLKERLRKIQQ 315
>BC016881-1|AAH16881.1| 638|Homo sapiens Unknown (protein for
IMAGE:3914496) protein.
Length = 638
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 EIFVKEHNREYKDDADRELHYQSFKKHLAEINQ 242
E+ VK H RE+++ D E+ + K+ L +I Q
Sbjct: 270 EVNVKSHQREHQNIQDLEIENEDLKERLRKIQQ 302
>AK055435-1|BAB70922.1| 634|Homo sapiens protein ( Homo sapiens
cDNA FLJ30873 fis, clone FEBRA2004325, moderately
similar to Canis familiaris mRNA for C3VS protein. ).
Length = 634
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 EIFVKEHNREYKDDADRELHYQSFKKHLAEINQ 242
E+ VK H RE+++ D E+ + K+ L +I Q
Sbjct: 270 EVNVKSHQREHQNIQDLEIENEDLKERLRKIQQ 302
>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
Length = 1416
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 EIFVKEHNREYKDDADRELHYQSFKKHLAEINQ 242
E+ VK H RE+++ D E+ + K+ L +I Q
Sbjct: 283 EVNVKSHQREHQNIQDLEIENEDLKERLRKIQQ 315
>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
Length = 1416
Score = 29.1 bits (62), Expect = 8.5
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 144 EIFVKEHNREYKDDADRELHYQSFKKHLAEINQ 242
E+ VK H RE+++ D E+ + K+ L +I Q
Sbjct: 283 EVNVKSHQREHQNIQDLEIENEDLKERLRKIQQ 315
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,528,551
Number of Sequences: 237096
Number of extensions: 1086674
Number of successful extensions: 6781
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6781
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -